RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ADPGKQ9BRR6 497 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF670Q9BS34 389 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CRISPLD1Q9H336 500 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PRDM12Q9H4Q4 367 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HHATLQ9HCP6 504 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 DCAF13Q9NV06 445 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PDP1Q9P0J1 537 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 GHRLQ9UBU3 117 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 EXO1Q9UQ84 846 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CBY1Q9Y3M2 126 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ARID2Q68CP9 1835 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SOWAHBA6NEL2 793 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CA12O43570 354 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 GRAP2O75791 330 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CDRT1O95170 752 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CRYBA1P05813 215 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 GPD1P21695 349 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PAICSP22234 425 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 RORAP35398 523 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CRYBB2P43320 205 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PIK3CGP48736 1102 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 GPR143P51810 404 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CTSCP53634 463 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 HNRNPA0Q13151 305 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CRHR2Q13324 411 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 GTF2H3Q13889 308 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF628Q5EBL2 1059 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF678Q5SXM1 525 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PDE12Q6L8Q7 609 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SLC9B2Q86UD5 537 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 DENND6AQ8IWF6 608 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CCDC116Q8IYX3 515 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 BMPERQ8N8U9 685 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CAMKVQ8NCB2 501 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF548Q8NEK5 533 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 OR1S1Q8NH92 325 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CA5BP1Q8WTZ4 195 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 ULK4Q96C45 1275 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 BBS4Q96RK4 519 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SOSTQ9BQB4 213 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 SNRNP25Q9BV90 132 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 WDR11Q9BZH6 1224 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 TFB2MQ9H5Q4 396 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 DDX31Q9H8H2 851 aaKnown RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 PRMT7Q9NVM4 692 aaPredicted RBP8.86□□□□□ -0.99
PDGFC-201ENST00000274071 LAMP5Q9UJQ1 280 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 CLCA2Q9UQC9 943 aa8.86□□□□□ -0.99
PDGFC-201ENST00000274071 C2CD4BA6NLJ0 364 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MYO1GB0I1T2 1018 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 E9PQ18 207 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 CXCR6O00574 342 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SIX3O95343 332 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 LGI1O95970 557 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 GLUD1P00367 558 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 FGF4P08620 206 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ATP5A1P25705 553 aaKnown RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SSPNQ14714 243 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SSX2Q16385 188 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 UNC50Q53HI1 259 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 HAGHLQ6PII5 290 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SERINC5Q86VE9 423 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SLC22A9Q8IVM8 553 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 DPP10Q8N608 796 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 OR2T35Q8NGX2 323 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ZDHHC1Q8WTX9 485 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 NUDT8Q8WV74 236 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 P2RY11Q96G91 374 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 TCF25Q9BQ70 676 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ALX4Q9H161 411 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 XYLT2Q9H1B5 865 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 OR51J1Q9H342 316 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF334Q9HCZ1 680 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 RAD18Q9NS91 495 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ING1Q9UK53 422 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MEIKINA0A087WXM9 373 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 GPR171O14626 319 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 AZIN1O14977 448 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 BEST1O76090 585 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 AP2A2O94973 939 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SIX6O95475 246 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 CD19P15391 556 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ITGB7P26010 798 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 LAP3P28838 519 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SOX3P41225 446 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ASPAP45381 313 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MAZP56270 477 aaKnown RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MC2RQ01718 297 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 EIF4HQ15056 248 aaKnown RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PLA1AQ53H76 456 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SFRP5Q5T4F7 317 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PRAMEF18Q5VWM3 479 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PRAMEF13Q5VWM6 474 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 HSDL2Q6YN16 418 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ZDHHC17Q8IUH5 632 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 NANOGP1Q8N7R0 232 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PROKR1Q8TCW9 393 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 OTUB1Q96FW1 271 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 RBM18Q96H35 190 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms