RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ITM2AO43736 263 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TLX2O43763 284 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 RAD51DO75771 328 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 DDNO94850 711 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 RPP14O95059 124 aaKnown RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 VNN2O95498 520 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CHAF1BQ13112 559 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 FNDC8Q8TC99 324 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TAS2R3Q9NYW6 316 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 PRODH2Q9UF12 536 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF225Q9UK10 706 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 LIPT1Q9Y234 373 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 DENRO43583 198 aaKnown RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 OXSR1O95747 527 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CLRN1P58418 232 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TBRG1Q3YBR2 411 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 PLEKHS1Q5SXH7 462 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 SLC2A7Q6PXP3 512 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 SUSD3Q96L08 255 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 MEPEQ9NQ76 525 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 PAK1IP1Q9NWT1 392 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 CKAP5Q14008 2032 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 NT5C1B-RDH14C9J2C7 533 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TNFP01375 233 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 EFNA1P20827 205 aaPredicted RBP7.71□□□□□ -1.18
LIMD1-201ENST00000273317 OXTRP30559 389 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF81P51508 661 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ARSKQ6UWY0 536 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 TSPAN33Q86UF1 283 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 BCO2Q9BYV7 579 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ADAP2Q9NPF8 381 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ACSL5Q9ULC5 683 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 ASB4Q9Y574 426 aa7.71□□□□□ -1.18
LIMD1-201ENST00000273317 AHSA1O95433 338 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SEC13P55735 322 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 GSCP56915 257 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PIAS4Q8N2W9 510 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 GALNT6Q8NCL4 622 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CMASQ8NFW8 434 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 OR2T33Q8NG76 320 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 LRCH3Q96II8 777 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 GAS2L1Q99501 681 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 DNAJC27Q9NZQ0 273 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 YJEFN3A6XGL0 299 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ENPP3O14638 875 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 OAZ2O95190 189 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ADH5P11766 374 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ARSFP54793 590 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ST3GAL4Q11206 333 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RGMBQ6NW40 437 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 Q8N402 240 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 NEIL3Q8TAT5 605 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 EMID1Q96A84 441 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TRMT61BQ9BVS5 477 aaKnown RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SH2B3Q9UQQ2 575 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RGPD5Q99666 1765 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 INMT-MINDY4F8WBC2 141 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 EPOP01588 193 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RHCEP18577 417 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SLC36A3Q495N2 470 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM69Q5SWH9 247 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 LIPJQ5W064 366 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CDCA2Q69YH5 1023 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SLC9B2Q86UD5 537 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF675Q8TD23 568 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM203Q969S6 136 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF696Q9H7X3 374 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TPT1P8Q9HAU6 139 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 NLE1Q9NVX2 485 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TAS2R8Q9NYW2 309 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PADI2Q9Y2J8 665 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 BHMG1C9JSJ3 638 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 VNN1O95497 513 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 THEGLP0DJG4 465 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ACTBP60709 375 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ACTG1P63261 375 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PCLAFQ15004 111 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PDGFRLQ15198 375 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 H3BSH0 61 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF701M0R085 212 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SAP18O00422 153 aaKnown RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CREBL2O60519 120 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SOCS5O75159 536 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 UFM1P61960 85 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SLC27A4Q6P1M0 643 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ARHGAP11AQ6P4F7 1023 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF440Q8IYI8 595 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 MARVELD2Q8N4S9 558 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 TMEM248Q9NWD8 314 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 A0A0G2JLL6 359 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 XPNPEP2O43895 674 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SPATA31D3P0C874 917 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CCND3P30281 292 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 CTSOP43234 321 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 RAB11BQ15907 218 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 SPATA31D4Q6ZUB0 917 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KCTD9Q7L273 389 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 PRRT2Q7Z6L0 340 aaPredicted RBP7.7□□□□□ -1.18
LIMD1-201ENST00000273317 KIF18BQ86Y91 864 aa7.7□□□□□ -1.18
LIMD1-201ENST00000273317 NRSN1Q8IZ57 195 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms