RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 XKRXQ6PP77 449 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 LIPIQ6XZB0 460 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 ARHGAP36Q6ZRI8 547 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 SLC16A12Q6ZSM3 486 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CUZD1Q86UP6 607 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PIM3Q86V86 326 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 ZDHHC13Q8IUH4 622 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PSTKQ8IV42 348 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CLIP4Q8N3C7 705 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RTL3Q8N8U3 475 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 OR6C4Q8NGE1 309 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RHOXF1Q8NHV9 184 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 FCGR1BQ92637 280 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 HTRA1Q92743 480 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 FKBP10Q96AY3 582 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 NACC2Q96BF6 587 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CLIP3Q96DZ5 547 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 TSPAN17Q96FV3 270 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CELF6Q96J87 481 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 ELMO2Q96JJ3 720 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CCDC74BQ96LY2 380 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 NSMCE2Q96MF7 247 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 MUS81Q96NY9 551 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 AGAP4Q96P64 663 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 CSF3RQ99062 836 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 COQ7Q99807 217 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 DHRS9Q9BPW9 319 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 RBM4BQ9BQ04 359 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 RBM4Q9BWF3 364 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 TRIT1Q9H3H1 467 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 RUBCNLQ9H714 662 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 KAT8Q9H7Z6 458 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PDFQ9HBH1 243 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 IARS2Q9NSE4 1012 aaKnown RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 OCIAD1Q9NX40 245 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 KLHL8Q9P2G9 620 aaPredicted RBP6.33□□□□□ -1.4
CD53-201ENST00000271324 C3orf18Q9UK00 162 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 AP4E1Q9UPM8 1137 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 FIS1Q9Y3D6 152 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 PCDHGB1Q9Y5G3 927 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 A3GALT2U3KPV4 340 aa6.33□□□□□ -1.4
CD53-201ENST00000271324 MYO9AB2RTY4 2548 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 TRBV23OR9-2A0A075B6M9 112 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 PRSS38A1L453 326 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 LOC110117498-PIK3R3F6TDL0 507 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 STMND1H3BQB6 276 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CACNB4O00305 520 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 PPM1DO15297 605 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 NUDT21O43809 227 aaKnown RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 DLX3O60479 287 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 ICMTO60725 284 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 AP2A1O95782 977 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 NPPAP01160 153 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 JUNP05412 331 aaKnown RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 CEACAM5P06731 702 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 YES1P07947 543 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 ABCB1P08183 1280 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 RBP1P09455 135 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 PRKAR1AP10644 381 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 SFTPCP11686 197 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CR2P20023 1033 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 SAT1P21673 171 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 PRKACBP22694 351 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 IL4RP24394 825 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 PSMB4P28070 264 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CSF2RBP32927 897 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 TRIM23P36406 574 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 ARL1P40616 181 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 GRIA1P42261 906 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 PTPN9P43378 593 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 GLRBP48167 497 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CLK1P49759 484 aaKnown RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 MLLT10P55197 1068 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 KIAA1024LP59773 190 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 GBE1Q04446 702 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CHRNB3Q05901 458 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 RIPPLY1Q0D2K3 151 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 NFYCQ13952 458 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 GRM3Q14832 879 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CTF1Q16619 201 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 FAM83EQ2M2I3 478 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 ZNF404Q494X3 552 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 OTUD3Q5T2D3 398 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 PNCKQ6P2M8 343 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 CYP4V2Q6ZWL3 525 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 CHST15Q7LFX5 561 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 STRADAQ7RTN6 431 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 BTLAQ7Z6A9 289 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 TMEM135Q86UB9 458 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 C17orf82Q86X59 251 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 ZNF761Q86XN6 746 aaPredicted RBP6.32□□□□□ -1.4
CD53-201ENST00000271324 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 GALNT12Q8IXK2 581 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 IL22RA1Q8N6P7 574 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 AMER2Q8N7J2 671 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 KBTBD8Q8NFY9 601 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 ZDHHC1Q8WTX9 485 aa6.32□□□□□ -1.4
CD53-201ENST00000271324 KCTD4Q8WVF5 259 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms