RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 KHSRPQ92945 711 aaKnown RBP eCLIP14.81□□□□□ -0.048e-7■□□□□ 10.1
TIMP3-201ENST00000266085 GORASP1Q9BQQ3 440 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 PDCD10Q9BUL8 212 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ACTL8Q9H568 366 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 FBRSQ9HAH7 460 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 TCRBV5S1A1TA0A578 114 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 CPNE3O75131 537 aaKnown RBP14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF3P17036 446 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 HOXD9P28356 352 aaPredicted RBP14.81□□□□□ -0.04
TIMP3-201ENST00000266085 GNALP38405 381 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 TAZQ16635 292 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 C5orf22Q49AR2 442 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 NADK2Q4G0N4 442 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 NIPAL1Q6NVV3 410 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 NXPE4Q6UWF7 544 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 USP53Q70EK8 1073 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 MOAP1Q96BY2 351 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ZDHHC12Q96GR4 267 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ZSWIM3Q96MP5 696 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 CD180Q99467 661 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 TBX5Q99593 518 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 EPYCQ99645 322 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 BCL2L14Q9BZR8 327 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 IGSF5Q9NSI5 407 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 LAMTOR5O43504 91 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 CDC123O75794 336 aaPredicted RBP14.81□□□□□ -0.04
TIMP3-201ENST00000266085 IFNA6P05013 189 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 THEGLP0DJG4 465 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 DRD1P21728 446 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ITGB7P26010 798 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ERVPABLB-1P60509 514 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 LAPTM4AQ15012 233 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 LIPIQ6XZB0 460 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 EEDO75530 441 aaKnown RBP14.81□□□□□ -0.04
TIMP3-201ENST00000266085 IGFBP6P24592 240 aaPredicted RBP14.81□□□□□ -0.04
TIMP3-201ENST00000266085 SLC6A11P48066 632 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 UNC5DQ6UXZ4 953 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 PARS2Q7L3T8 475 aaKnown RBP14.81□□□□□ -0.04
TIMP3-201ENST00000266085 PHOSPHO1Q8TCT1 267 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 MCOLN1Q9GZU1 580 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 SNTG1Q9NSN8 517 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF222Q9UK12 451 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 LRRC42Q9Y546 428 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 PCDHB3Q9Y5E6 796 aa14.81□□□□□ -0.04
TIMP3-201ENST00000266085 FEZF1A0PJY2 475 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 GJB3O75712 270 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 F11P03951 625 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 CD72P21854 359 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PPP3R1P63098 170 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SLAMF1Q13291 335 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 MADCAM1Q13477 382 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 ZBED5Q49AG3 693 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 CATSPEREQ5SY80 951 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 KIAA1614Q5VZ46 1190 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 GHDCQ8N2G8 530 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 CPEB1Q9BZB8 566 aaKnown RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TOR3AQ9H497 397 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TREX1Q9NSU2 369 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 CCM2LQ9NUG4 571 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PTBP2Q9UKA9 531 aaKnown RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 GPR34Q9UPC5 381 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 KNTC1P50748 2209 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TOR1BO14657 336 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 RLN1P04808 185 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 OR1E2P47887 323 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 EGFLAMQ63HQ2 1017 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SLC22A15Q8IZD6 547 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 CLIP4Q8N3C7 705 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 KLHL36Q8N4N3 616 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TMEM156Q8N614 296 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 OR13J1Q8NGT2 312 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 ANKRA2Q9H9E1 313 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TNFRSF10DQ9UBN6 386 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TAF4O00268 1085 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SLC22A1O15245 554 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 HTRA2O43464 458 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 AKAP8O43823 692 aaKnown RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PENKP01210 267 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 HNRNPA2B1P22626 353 aaKnown RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SOX9P48436 509 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PXNP49023 591 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF140P52738 457 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 RNASE12Q5GAN4 147 aaKnown RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 MANEALQ5VSG8 457 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 ADNP2Q6IQ32 1131 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 NR4A3Q92570 626 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 NT5C3BQ969T7 300 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 RDH12Q96NR8 316 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TGM7Q96PF1 710 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 MCHR1Q99705 422 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 GINS4Q9BRT9 223 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TSSK6Q9BXA6 273 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TRIM2Q9C040 744 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TCF7L1Q9HCS4 588 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 FAM221BA6H8Z2 402 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 HHLA1C9JL84 531 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TLX2O43763 284 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SOX14O95416 240 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 CH25HO95992 272 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 OXTRP30559 389 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms