RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PRORSD1PA6NEY8 169 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 PDLIM1O00151 329 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 DIRAS1O95057 198 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 CHRM5P08912 532 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 PAICSP22234 425 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 DUSP3P51452 185 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 MC1RQ01726 317 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 MESP2Q0VG99 397 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 NDUFAF5Q5TEU4 345 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 OR56A1Q8NGH5 318 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 OR52L1Q8NGH7 329 aa13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 CDX2Q99626 313 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 RPF2Q9H7B2 306 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 IFT80Q9P2H3 777 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-201ENST00000265810 SBK3P0C264 359 aa13.83□□□□□ -0.19
PDLIM2-201ENST00000265810 AGXTP21549 392 aa13.83□□□□□ -0.19
PDLIM2-201ENST00000265810 PFN3P60673 137 aa13.83□□□□□ -0.19
PDLIM2-201ENST00000265810 TTLL10Q6ZVT0 673 aa13.83□□□□□ -0.19
PDLIM2-201ENST00000265810 BRWD1Q9NSI6 2320 aa13.83□□□□□ -0.19
PDLIM2-201ENST00000265810 SLC23A2Q9UGH3 650 aa13.83□□□□□ -0.19
PDLIM2-201ENST00000265810 C9P02748 559 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 THRBP10828 461 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 UQCRC2P22695 453 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 MAZP56270 477 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 MTAPQ13126 283 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF267Q14586 743 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 NR1D2Q14995 579 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 SMU1Q2TAY7 513 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 PYCR3Q53H96 274 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 SLCO4C1Q6ZQN7 724 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 UBTD2Q8WUN7 234 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 KAT2AQ92830 837 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 PTCHD1Q96NR3 888 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 C19orf43Q9BQ61 176 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 HCN3Q9P1Z3 774 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 OAZ3Q9UMX2 235 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 A0A087WXM4 84 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 NOBOXO60393 691 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 SCN2BO60939 215 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 REM1O75628 298 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 HIST1H2ABP04908 130 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 GABRG2P18507 467 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 JAK1P23458 1154 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 OR4D2P58180 307 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 BIKQ13323 160 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF630Q2M218 657 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 CYHR1Q6ZMK1 362 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 RNF44Q7L0R7 432 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 HIST3H2AQ7L7L0 130 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 OR2T11Q8NH01 316 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 HIST1H2ACQ93077 130 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 DPH2Q9BQC3 489 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 INPP5KQ9BT40 448 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 ZDHHC5Q9C0B5 715 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 PRTFDC1Q9NRG1 225 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 TRBC2A0A5B9 178 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 GFYI3L273 518 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 TLR4O00206 839 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 EI24O14681 340 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 KIF1CO43896 1103 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 GADD45GO95257 159 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 PGM3O95394 542 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 KLK3P07288 261 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 DRD2P14416 443 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 CD27P26842 260 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 RPL4P36578 427 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 RPS26P62854 115 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 GALNT18Q6P9A2 607 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 FAM83HQ6ZRV2 1179 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 OR2L8Q8NGY9 312 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC38A4Q969I6 547 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 BHLHE41Q9C0J9 482 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 POT1Q9NUX5 634 aa13.83□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC9B1P1A6NJY1 282 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 AQP9O43315 295 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC25A12O75746 678 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 CERS1P27544 350 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 COQ5Q5HYK3 327 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 HACD2Q6Y1H2 254 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 SYNPOQ8N3V7 929 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 OR56A3Q8NH54 315 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 GIPC3Q8TF64 312 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 GTPBP3Q969Y2 492 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 CLEC1BQ9P126 229 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 SORBS2O94875 1100 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 TSPAN12O95859 305 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 SYPP08247 313 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 NPPBP16860 134 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 TRIM69Q86WT6 500 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC30A8Q8IWU4 369 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 GJD3Q8N144 294 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 OR8D2Q9GZM6 311 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 LTB4R2Q9NPC1 389 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 RASSF1Q9NS23 344 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms