RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC36A4Q6YBV0 504 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ABHD13Q7L211 337 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 C16orf62Q7Z3J2 963 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 METTL4Q8N3J2 472 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 SPEM1Q8N4L4 309 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 FBXL6Q8N531 539 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 KCT2Q8NC54 265 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 DOK4Q8TEW6 326 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 CHTF18Q8WVB6 975 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ACTL8Q9H568 366 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ANKHQ9HCJ1 492 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 STARD5Q9NSY2 213 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 TMEM45AQ9NWC5 275 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 GMEB2Q9UKD1 530 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 SAMHD1Q9Y3Z3 626 aaKnown RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 PCDHB3Q9Y5E6 796 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 COL4A4P53420 1690 aaPredicted RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 OBSL1O75147 1896 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 CACNA1EQ15878 2313 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 C2orf16Q68DN1 1984 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 EME2A4GXA9 379 aaPredicted RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 M0QX08 132 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 FXYD1O00168 92 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 CLEC3AO75596 197 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 NUDT1P36639 197 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 CCR5P51681 352 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 STX4Q12846 297 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 KIAA0040Q15053 153 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 SFT2D3Q587I9 215 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 TPRG1LQ5T0D9 272 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 KRT73Q86Y46 540 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ZDHHC21Q8IVQ6 265 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 OR4N5Q8IXE1 308 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 PRSS58Q8IYP2 241 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ACOT4Q8N9L9 421 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 TTC29Q8NA56 475 aaPredicted RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 ADAMTS15Q8TE58 950 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 NRG4Q8WWG1 115 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 METTL2AQ96IZ6 378 aaKnown RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 RPF2Q9H7B2 306 aaKnown RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 ANKMY1Q9P2S6 941 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 MUTYHQ9UIF7 546 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 PCDHA9Q9Y5H5 950 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 SCN3AQ9NY46 2000 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 SPTY2D1-AS1A0A0U1RR47 76 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 VGLL3A8MV65 326 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 PLPP1O14494 284 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 BMP10O95393 424 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 EML2O95834 649 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ETFAP13804 333 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 UQCRBP14927 111 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 CDH2P19022 906 aaPredicted RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 RAD23AP54725 363 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 RACK1P63244 317 aaKnown RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 MTAPQ13126 283 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 LASP1Q14847 261 aaKnown RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 MINDY4Q4G0A6 757 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 TMEM35AQ53FP2 167 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 RUNDC3AQ59EK9 446 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 FGD3Q5JSP0 725 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ABRAXAS1Q6UWZ7 409 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 METTL27Q8N6F8 245 aaPredicted RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 SMYD1Q8NB12 490 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ZFYVE21Q9BQ24 234 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 GTPBP2Q9BX10 602 aaKnown RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 MS4A8Q9BY19 250 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ADAP2Q9NPF8 381 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 POT1Q9NUX5 634 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 ZNF624Q9P2J8 865 aaPredicted RBP8.89□□□□□ -0.99
SSR3-201ENST00000265044 SEC14L3Q9UDX4 400 aa8.89□□□□□ -0.99
SSR3-201ENST00000265044 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 KCNE1BA0A087WTH5 132 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 G3V2T6 193 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 ACOT8O14734 319 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 PPM1DO15297 605 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 BCAT2O15382 392 aaPredicted RBP8.88□□□□□ -0.99
SSR3-201ENST00000265044 POU1F1P28069 291 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 BCL6P41182 706 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
SSR3-201ENST00000265044 HBA1P69905 142 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 PRR5P85299 388 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 SLC13A2Q13183 592 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 SCARB2Q14108 478 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 PDK3Q15120 406 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 NDUFA9Q16795 377 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 VMACQ2NL98 169 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 KIAA1614Q5VZ46 1190 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 DLEU7Q6UYE1 221 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 C11orf74Q86VG3 221 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 LAS2Q8IYD9 372 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 OR52J3Q8NH60 311 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 NFKBIDQ8NI38 313 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 BHLHE41Q9C0J9 482 aaPredicted RBP8.88□□□□□ -0.99
SSR3-201ENST00000265044 ROGDIQ9GZN7 287 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 CCM2LQ9NUG4 571 aaPredicted RBP8.88□□□□□ -0.99
SSR3-201ENST00000265044 C2orf42Q9NWW7 574 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 MRPS33Q9Y291 106 aaKnown RBP8.88□□□□□ -0.99
SSR3-201ENST00000265044 NINQ8N4C6 2090 aa8.88□□□□□ -0.99
SSR3-201ENST00000265044 GPR179Q6PRD1 2367 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms