RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 OR4A15Q8NGL6 344 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 CDC26Q8NHZ8 85 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 NPLOC4Q8TAT6 608 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 CXorf40BQ96DE9 158 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 RNF31Q96EP0 1072 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ABCG8Q9H221 673 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 TMCC3Q9ULS5 477 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 Q9Y3F1 56 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 ENPP4Q9Y6X5 453 aa11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-201ENST00000263780 FAM240BA0A1B0GVZ2 78 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 RNASET2O00584 256 aaKnown RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PDPK1O15530 556 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 ADAP00813 363 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC2A2P11168 524 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PSKH1P11801 424 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 CKMT1AP12532 417 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 POU2F1P14859 743 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 AOAHP28039 575 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 POU1F1P28069 291 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 NSG1P42857 185 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC6A12P48065 614 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PTPN5P54829 565 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 RRAS2P62070 204 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 CDONQ4KMG0 1287 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 KLHL17Q6TDP4 642 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 CASP12Q6UXS9 341 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC51BQ86UW2 128 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 FAM20CQ8IXL6 584 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 CRISPLD1Q9H336 500 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 TMEM38AQ9H6F2 299 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 TXNL4BQ9NX01 149 aaKnown RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PLEKHB1Q9UF11 243 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 GABRQQ9UN88 632 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 GSTK1Q9Y2Q3 226 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 HSPB11Q9Y547 144 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 GLYATL1P3A0A0U1RQE8 302 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 LEUTXA8MZ59 168 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PCDH17O14917 1159 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC16A5O15375 505 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 SRPRAP08240 638 aaKnown RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 OSMP13725 252 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 GSTM5P46439 218 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 OR1E2P47887 323 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 INPP1P49441 399 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 CHIT1Q13231 466 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 ILKQ13418 452 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 MBTPS1Q14703 1052 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PTPRRQ15256 657 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF630Q2M218 657 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PTCHD3Q3KNS1 767 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PRAMEF19Q5SWL8 479 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 BICRALQ6AI39 1079 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 TRIM40Q6P9F5 258 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 OXR1Q8N573 874 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 LSMEM1Q8N8F7 131 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 FBXO22Q8NEZ5 403 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 OR52N2Q8NGI0 321 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 PRRG3Q9BZD7 231 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 IL26Q9NPH9 171 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 NDOR1Q9UHB4 597 aa11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 AFF4Q9UHB7 1163 aaKnown RBP11.87□□□□□ -0.51
CHMP2B-201ENST00000263780 A0A1B0GVM2 712 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 MGAT4DA6NG13 374 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 GABRR3A8MPY1 467 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 GAPDHSO14556 408 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 PCDH7O60245 1069 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 OPN1SWP03999 348 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ADRA2AP08913 450 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CTSHP09668 335 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ATF6P18850 670 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 UQCRC1P31930 480 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 AP1S2P56377 157 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CLDN20P56880 219 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 RHOAP61586 193 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 AP1S1P61966 158 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 RPS24P62847 133 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 IRF8Q02556 426 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 MXD1Q05195 221 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 SP140Q13342 867 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 WSCD2Q2TBF2 565 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF628Q5EBL2 1059 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CRB2Q5IJ48 1285 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ANGPTL8Q6UXH0 198 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 PAMR1Q6UXH9 720 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF783Q6ZMS7 281 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 NXPE1Q8N323 547 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 NATD1Q8N6N6 113 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 HJURPQ8NCD3 748 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 OR8J1Q8NGP2 316 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 EID2BQ96D98 161 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 OMA1Q96E52 524 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 SPATA6Q9NWH7 488 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 MGAT4BQ9UQ53 548 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 STK25O00506 426 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms