RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CLDN8P56748 225 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 PLIN5Q00G26 463 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF763Q0D2J5 394 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 C2orf80Q0P641 193 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 PGS1Q32NB8 556 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 VPS26BQ4G0F5 336 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 C18orf63Q68DL7 685 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM71E1Q6IPT2 247 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 BLOC1S3Q6QNY0 202 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 RBM44Q6ZP01 1051 aaKnown RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 ABHD13Q7L211 337 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 PAGE2Q7Z2X7 111 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 MARCH9Q86YJ5 346 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 FBXO27Q8NI29 283 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.23□□□□□ -0.937e-13■□□□□ 10.5
SNRNP40-201ENST00000263694 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 PMEPA1Q969W9 287 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 METTL2AQ96IZ6 378 aaKnown RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 NLNQ9BYT8 704 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 COPS7BQ9H9Q2 264 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC52A3Q9NQ40 469 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 ZIM2Q9NZV7 527 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 C5AR2Q9P296 337 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 DHCR7Q9UBM7 475 aaKnown RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 ATG4BQ9Y4P1 393 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 TMEM184BQ9Y519 407 aaPredicted RBP9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 ASB4Q9Y574 426 aa9.23□□□□□ -0.93
SNRNP40-201ENST00000263694 DMXL1Q9Y485 3027 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 URADA6NGE7 173 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 GABRR3A8MPY1 467 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM227AF5H4B4 570 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 FBP2O00757 339 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF749O43361 778 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 FOXD2O60548 495 aaPredicted RBP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 GALR3O60755 368 aaPredicted RBP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 RDH16O75452 317 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ITIH1P19827 911 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ALAS2P22557 587 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 CSTF2P33240 577 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ALDH9A1P49189 494 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 MTTPP55157 894 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ITGA1P56199 1179 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 PHC1P78364 1004 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 MAT1AQ00266 395 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 E2F1Q01094 437 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 TGM3Q08188 693 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 UGT8Q16880 541 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 SYT16Q17RD7 645 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF385BQ569K4 471 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 TCTE1Q5JU00 501 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 SPANXN4Q5MJ08 99 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 MANEAQ5SRI9 462 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 C1orf189Q5VU69 101 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM91A1Q658Y4 838 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 MRM1Q6IN84 353 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 CCDC121Q6ZUS5 278 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 TTLL10Q6ZVT0 673 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 RIMKLAQ8IXN7 391 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 TMEM132CQ8N3T6 1108 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 SRFBP1Q8NEF9 429 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 NSL1Q96IY1 281 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 NPAS2Q99743 824 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 CLMPQ9H6B4 373 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 CUTCQ9NTM9 273 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 SIDT1Q9NXL6 827 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 HCN3Q9P1Z3 774 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 CCDC88CQ9P219 2028 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 NDOR1Q9UHB4 597 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 SERTAD3Q9UJW9 196 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 ADAM29Q9UKF5 820 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC22A7Q9Y694 548 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 MAU2Q9Y6X3 613 aa9.22□□□□□ -0.93
SNRNP40-201ENST00000263694 MYOCOSA0A1B0GUC4 107 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 A0A1W2PR48 441 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM234BA2RU67 622 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 FITM1A5D6W6 292 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ASPDHA6ND91 283 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 TXNDC9O14530 226 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 TM4SF5O14894 197 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 PGRMC2O15173 223 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 B3GALT2O43825 422 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 GFRA3O60609 400 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 CSO75390 466 aaKnown RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 MT-CO3P00414 261 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 SNRPB2P08579 225 aaKnown RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 FTH1P19P0C7X4 201 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 LAMP1P11279 417 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ESRRAP11474 423 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ACPPP15309 386 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 JAK1P23458 1154 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 OR1D4P47884 311 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 MRPL19P49406 292 aaKnown RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 LIMK1P53667 647 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 LIM2P55344 173 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 SIM1P81133 766 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 BNIP1Q12981 228 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 CYLC2Q14093 348 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ERV3-1Q14264 604 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms