RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 NLKQ9UBE8 527 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 KCNK6Q9Y257 313 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 DISC1C4P0D8 188 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 HTR1AP08908 422 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 SELPP16109 830 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 LRP8Q14114 963 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 CEACAM19Q7Z692 300 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 WDR20Q8TBZ3 569 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 MAL2Q969L2 176 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 KIAA1191Q96A73 305 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 NTAN1Q96AB6 310 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 TMEM41AQ96HV5 264 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 TSNAXQ99598 290 aaKnown RBP11.64□□□□□ -0.55
SMG6-201ENST00000263073 C17orf62Q9BQA9 187 aa11.64□□□□□ -0.55
SMG6-201ENST00000263073 NID2Q14112 1375 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 FUOMA2VDF0 154 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ZNF860A6NHJ4 632 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 RHPN2P1A8MT19 583 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 H0YJX3 145 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 IFNA21P01568 189 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CAPNS1P04632 268 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 OPRL1P41146 370 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ACTR1BP42025 376 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ACTR1AP61163 376 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ILF3Q12906 894 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■■■□□ 18.9
SMG6-201ENST00000263073 MS4A13Q5J8X5 152 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 GPR52Q9Y2T5 361 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 PABPC4LP0CB38 370 aaKnown RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 GSTM3P21266 225 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CCKBRP32239 447 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 RASGEF1BQ0VAM2 473 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 NELL2Q99435 816 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 C7orf50Q9BRJ6 194 aaKnown RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 TBL1XR1Q9BZK7 514 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 KLHL33A6NCF5 533 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 DNASE1P24855 282 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 MS4A2Q01362 244 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ST3GAL3Q11203 375 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 PON3Q15166 354 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 SLC30A8Q8IWU4 369 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 HS3ST5Q8IZT8 346 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 HERVK_113Q902F9 699 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 HSPA12BQ96MM6 686 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CAMK1GQ96NX5 476 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ATG5Q9H1Y0 275 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CXXC1Q9P0U4 656 aaPredicted RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 LAMP5Q9UJQ1 280 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 FBXO9Q9UK97 447 aaPredicted RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 PCDHB14Q9Y5E9 798 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 LDOC1O95751 146 aaPredicted RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 ACRP10323 421 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 DRD5P21918 477 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 NFATC3Q12968 1075 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 PAFAH1B3Q15102 231 aaKnown RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 NNATQ16517 81 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 UNC50Q53HI1 259 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CARM1Q86X55 608 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 MEX3DQ86XN8 651 aaKnown RBP11.63□□□□□ -0.55
SMG6-201ENST00000263073 SGCDQ92629 289 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 HIST1H2AAQ96QV6 131 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ARL6Q9H0F7 186 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 EVI2BP34910 448 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 SEC23BQ15437 767 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 NKAPLQ5M9Q1 402 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 AGTRAPQ6RW13 159 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 TMEM17Q86X19 198 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 OR6N2Q8NGY6 317 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 CMTM7Q96FZ5 175 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 SLC45A3Q96JT2 553 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ADAMTS10Q9H324 1103 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 FBRSQ9HAH7 460 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 ABCD2Q9UBJ2 740 aa11.63□□□□□ -0.55
SMG6-201ENST00000263073 FMN2Q9NZ56 1722 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 A0A0U1RQS6 177 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 TNFSF12O43508 249 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 FMO6PO60774 539 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 CYB5AP00167 134 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 C8AP07357 584 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 GSTT2P0CG29 244 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 CD1DP15813 335 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 PORP16435 677 aaPredicted RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 AGXTP21549 392 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 VMACQ2NL98 169 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 KRBOX4Q5JUW0 171 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 FCRLBQ6BAA4 426 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 PAMR1Q6UXH9 720 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 PLEKHG7Q6ZR37 379 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 COMTD1Q86VU5 262 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 DEFB119Q8N690 84 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 IQCF1Q8N6M8 205 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SCRN2Q96FV2 425 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 DGAT2Q96PD7 388 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 SECISBP2Q96T21 854 aaKnown RBP11.62□□□□□ -0.55
SMG6-201ENST00000263073 SMOQ99835 787 aa11.62□□□□□ -0.55
SMG6-201ENST00000263073 BCO2Q9BYV7 579 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms