RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SFTPA2Q8IWL1 248 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ADGRF3Q8IZF5 1079 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ZNF786Q8N393 782 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 METTL4Q8N3J2 472 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SLC44A3Q8N4M1 653 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TNIP2Q8NFZ5 429 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ABCG2Q9UNQ0 655 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SLC17A4Q9Y2C5 497 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 MAP4K5Q9Y4K4 846 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 PRMT3O60678 531 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 CNOT3O75175 753 aaKnown RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 DEAF1O75398 565 aaPredicted RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 RPN2P04844 631 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TNFRSF1BP20333 461 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 NR4A1P22736 598 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 YAP1P46937 504 aaKnown RBP12.97□□□□□ -0.33
VMP1-201ENST00000262291 CCR8P51685 355 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 VMACQ2NL98 169 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 DPY19L1Q2PZI1 675 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 KIAA1161Q6NSJ0 714 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TMEM26Q6ZUK4 368 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 UTS2BQ765I0 119 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SLC9B2Q86UD5 537 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SLC15A4Q8N697 577 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 TMEM145Q8NBT3 493 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 OR4E2Q8NGC2 313 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 AIF1LQ9BQI0 150 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 EHD1Q9H4M9 534 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SYNPO2LQ9H987 977 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 C2orf42Q9NWW7 574 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ACSL5Q9ULC5 683 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 ICKQ9UPZ9 632 aa12.97□□□□□ -0.33
VMP1-201ENST00000262291 SDK1Q7Z5N4 2213 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 PRSS38A1L453 326 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 KDM1AO60341 852 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 RASGRP1O95267 797 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 PTX3P26022 381 aaPredicted RBP12.96□□□□□ -0.33
VMP1-201ENST00000262291 TPMTP51580 245 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 RPS26P62854 115 aaKnown RBP12.96□□□□□ -0.33
VMP1-201ENST00000262291 TXNL4AP83876 142 aaKnown RBP12.96□□□□□ -0.33
VMP1-201ENST00000262291 ZNF33BQ06732 778 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 DEPDC1Q5TB30 811 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 NIPAL1Q6NVV3 410 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 FBXL6Q8N531 539 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.96□□□□□ -0.33
VMP1-201ENST00000262291 HPS1Q92902 700 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 TAMM41Q96BW9 452 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 COQ8BQ96D53 544 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 FCRL4Q96PJ5 515 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 KLHL25Q9H0H3 589 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 TMEM168Q9H0V1 697 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 KLHL31Q9H511 634 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 GPATCH2Q9NW75 528 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
VMP1-201ENST00000262291 TUBA8Q9NY65 449 aaPredicted RBP12.96□□□□□ -0.33
VMP1-201ENST00000262291 PADI4Q9UM07 663 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 MYO15AQ9UKN7 3530 aa12.96□□□□□ -0.33
VMP1-201ENST00000262291 C1orf226A1L170 272 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 KRBA1A5PL33 1030 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 GLOD5A6NK44 160 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 MYO1GB0I1T2 1018 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 H3BMQ9 156 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 FKBP9O95302 570 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 ERGP11308 486 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 ZNF182P17025 639 aaPredicted RBP12.96□□□□□ -0.34
VMP1-201ENST00000262291 ESRRGP62508 458 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 CSNK1G2P78368 415 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 IL1RL1Q01638 556 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 AGERQ15109 404 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 SF3B4Q15427 424 aaKnown RBP eCLIP12.96□□□□□ -0.345e-12■■■■■ 49.6
VMP1-201ENST00000262291 RPE65Q16518 533 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 CYBRD1Q53TN4 286 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 FAM71E1Q6IPT2 247 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 GALNT18Q6P9A2 607 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 FKBP9P1Q75LS8 142 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 SNX29P2Q8IUI4 249 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 VPS37AQ8NEZ2 397 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 PYURFQ96I23 114 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 COG8Q96MW5 612 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 SLC35A5Q9BS91 424 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 MIEF1Q9NQG6 463 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 ATAD3AQ9NVI7 634 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 NCKAP1Q9Y2A7 1128 aa12.96□□□□□ -0.34
VMP1-201ENST00000262291 G3V2T6 193 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 GPX2P18283 190 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 PIK3CBP42338 1070 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 MAPK12P53778 367 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 ARSFP54793 590 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 KCNJ8Q15842 424 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 RGS21Q2M5E4 152 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 KHDRBS2Q5VWX1 349 aaKnown RBP12.95□□□□□ -0.34
VMP1-201ENST00000262291 ZDHHC21Q8IVQ6 265 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 DHRSXQ8N5I4 330 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 MFSD2AQ8NA29 543 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 OR2A1Q8NGT9 310 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 ZFP90Q8TF47 636 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
VMP1-201ENST00000262291 TANKQ92844 425 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms