RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 BCL7CQ8WUZ0 217 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MYRFLQ96LU7 910 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PHF12Q96QT6 1004 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PCYT2Q99447 389 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TTYH2Q9BSA4 534 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 NTMT1Q9BV86 223 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ANKRD19PQ9H560 264 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM138Q9NPI0 162 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ACSS1Q9NUB1 689 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SLC6A14Q9UN76 642 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 A0A1W2PPM1 405 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 A0A1W2PRU2 124 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 IGLON5A6NGN9 336 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ARPC2O15144 300 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 DLX3O60479 287 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 UGT1A1P22309 533 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RALGDSQ12967 914 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 GPR139Q6DWJ6 353 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LHFPL3Q86UP9 236 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SIAH1Q8IUQ4 282 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CBR4Q8N4T8 237 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 OR10A6Q8NH74 314 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CASD1Q96PB1 797 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 IFT27Q9BW83 186 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RHBGQ9H310 441 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 EBF2Q9HAK2 575 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TRIM64BA6NI03 449 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 DISC1C4P0D8 188 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 CREG1O75629 220 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM63AO94886 807 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 S100A9P06702 114 aaKnown RBP4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LPLP06858 475 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 IL1R2P27930 398 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF181Q2M3W8 571 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 FAM131AQ6UXB0 335 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 RAB39BQ96DA2 213 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 SFXN2Q96NB2 322 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 DGCR6LQ9BY27 220 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 MAP4K5Q9Y4K4 846 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 PCDHGC4Q9Y5F7 938 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 ARL5AQ9Y689 179 aa4.16□□□□□ -1.74
VPS13C-202ENST00000261517 LRRC37AA6NMS7 1700 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 OR5K3A6NET4 321 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ERI3O43414 337 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 IDH3BO43837 385 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 NADKO95544 446 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ENGP17813 658 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 HSD17B12Q53GQ0 312 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ARHGAP40Q5TG30 622 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 DCAF12L1Q5VU92 463 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 GARNL3Q5VVW2 1013 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 KIAA0895LQ68EN5 471 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ZBTB10Q96DT7 871 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 MS4A4EQ96PG1 132 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 HCN2Q9UL51 889 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 NOX1Q9Y5S8 564 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 DENRO43583 198 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 BRINP1O60477 761 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CD1DP15813 335 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 AGTR1P30556 359 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 SLC9A3P48764 834 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 MLLT1Q03111 559 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CMIPQ8IY22 773 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 PAPD5Q8NDF8 572 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ACVR1CQ8NER5 493 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CLHC1Q8NHS4 586 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF570Q96NI8 536 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 NT5DC2Q9H857 520 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 MTHFD2LQ9H903 347 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CXorf21Q9HAI6 301 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 TPT1P8Q9HAU6 139 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 SLCO1B3Q9NPD5 702 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CD207Q9UJ71 328 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ARNTLO00327 626 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 DLGAP1O14490 977 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 STC2O76061 302 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 GLDCP23378 1020 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 PTGS2P35354 604 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 GATMP50440 423 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CLCNKAP51800 687 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CDH11P55287 796 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 TARDBPQ13148 414 aaKnown RBP eCLIP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CYBRD1Q53TN4 286 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 VWA5B1Q5TIE3 1220 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 GLT8D1Q68CQ7 371 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 SHQ1Q6PI26 577 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 PDZD3Q86UT5 571 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 TSPYL5Q86VY4 417 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 PM20D2Q8IYS1 436 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 INO80EQ8NBZ0 244 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 FOXRED1Q96CU9 486 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 S100A16Q96FQ6 103 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 GOLGA2P5Q9HBQ8 144 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF221Q9UK13 617 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 TRBC2A0A5B9 178 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 OR2T1O43869 369 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 MAFKO60675 156 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 HRGP04196 525 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms