RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CASP6P55212 293 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 SLC13A2Q13183 592 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 DOC2AQ14183 400 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 TRADDQ15628 312 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 MAATS1Q7Z4T9 603 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CLNKQ7Z7G1 428 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 SIAH3Q8IW03 269 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 C17orf53Q8N3J3 647 aaPredicted RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 TCAIMQ8N3R3 496 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 FAM98AQ8NCA5 519 aaKnown RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 B3GNT7Q8NFL0 401 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 SREK1Q8WXA9 508 aaKnown RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 QRFPRQ96P65 431 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CAPS2Q9BXY5 557 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 REXO4Q9GZR2 422 aaKnown RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 NT5DC2Q9H857 520 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CNOT10Q9H9A5 744 aaKnown RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 GPRC5BQ9NZH0 403 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 FBXW2Q9UKT8 454 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 MMACHCQ9Y4U1 282 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 ASB1Q9Y576 335 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CLDN16Q9Y5I7 305 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 EIF3HO15372 352 aaKnown RBP eCLIP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 ASNA1O43681 348 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CCNT2O60583 730 aaKnown RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CLEC3AO75596 197 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 HLCSP50747 726 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CLCN2P51788 898 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 PLTPP55058 493 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 RAB38P57729 211 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 RAB10P61026 200 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 ATP6V0D1P61421 351 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 ART3Q13508 389 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 KRTCAP3Q53RY4 240 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 SULT1C3Q6IMI6 304 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CCDC25Q86WR0 208 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 TICAM1Q8IUC6 712 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 SPPL2CQ8IUH8 684 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 SCUBE1Q8IWY4 988 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 PPM1NQ8N819 430 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 OR2L5Q8NG80 312 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 F2RL3Q96RI0 385 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 CSF3RQ99062 836 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 NPLQ9BXD5 320 aaPredicted RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF223Q9UK11 482 aaPredicted RBP17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 RNF112Q9ULX5 631 aa17.75■□□□□ 0.43
TM6SF1-201ENST00000258909 PKDREJQ9NTG1 2253 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 FCHO1O14526 889 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 MLYCDO95822 493 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ESRRAP11474 423 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 EPORP19235 508 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 TRHRP34981 398 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 RFC3P40938 356 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ADORA2A-AS1P86434 159 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ZKSCAN8Q15776 578 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 PDK4Q16654 411 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ADPRMQ3LIE5 342 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 KBTBD12Q3ZCT8 623 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 TRIM40Q6P9F5 258 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ABHD17CQ6PCB6 329 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 C16orf47Q6ZP98 133 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 NCCRP1Q6ZVX7 275 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 CMC1Q7Z7K0 106 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF808Q8N4W9 903 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 NCLNQ969V3 563 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 TMEM125Q96AQ2 219 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 UBXN10Q96LJ8 280 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ALG9Q9H6U8 611 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 TRIM45Q9H8W5 580 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 LIN28AQ9H9Z2 209 aaKnown RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 PRM3Q9NNZ6 103 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 PTBP2Q9UKA9 531 aaKnown RBP17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF835Q9Y2P0 537 aa17.74■□□□□ 0.43
TM6SF1-201ENST00000258909 DCHS2Q6V1P9 2916 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 NCOA6Q14686 2063 aaPredicted RBP17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 CLDN4O14493 209 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 PRKNO60260 465 aaPredicted RBP17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 SH3BGRLO75368 114 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 ZNF24P17028 368 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 GSTM2P28161 218 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 LIM2P55344 173 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 HSD17B7P56937 341 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 ILF2Q12905 390 aaKnown RBP17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 DLG1Q12959 904 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 SLMAPQ14BN4 828 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 RAPH1Q70E73 1250 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 PDPRQ8NCN5 879 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 ADAMTS18Q8TE60 1221 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 KIAA1191Q96A73 305 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 PTCD3Q96EY7 689 aaKnown RBP17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 SERINC2Q96SA4 455 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 EHD1Q9H4M9 534 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 COPS7BQ9H9Q2 264 aaPredicted RBP17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 FBN2P35556 2912 aa17.73■□□□□ 0.43
TM6SF1-201ENST00000258909 A0A088AWK7 358 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 CYR61O00622 381 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 ITGA10O75578 1167 aa17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 S100BP04271 92 aaPredicted RBP17.72■□□□□ 0.43
TM6SF1-201ENST00000258909 SNRPB2P08579 225 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms