RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 GSTM5P46439 218 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 TRA2BP62995 288 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 RAE1P78406 368 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 FOXK2Q01167 660 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 RUNX2Q13950 521 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 NCF4Q15080 339 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 PDCD2Q16342 344 aaPredicted RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 FAM47EQ6ZV65 393 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 WDR75Q8IWA0 830 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 DDIASQ8IXT1 998 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 CA13Q8N1Q1 262 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 CT55Q8WUE5 264 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 MR1Q95460 341 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 APIPQ96GX9 242 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 ZNF317Q96PQ6 595 aaPredicted RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 SIKE1Q9BRV8 207 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 CCDC86Q9H6F5 360 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 COPS7BQ9H9Q2 264 aaPredicted RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 LRTM1Q9HBL6 345 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 PRDM9Q9NQV7 894 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 C1orf109Q9NX04 203 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 KCMF1Q9P0J7 381 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 NXT1Q9UKK6 140 aaKnown RBP13.34□□□□□ -0.27
VPS25-201ENST00000253794 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
VPS25-201ENST00000253794 A0A0G2JN53 185 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 BLACEA4D250 179 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 C9J4A7 227 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 SDHDO14521 159 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 CHST10O43529 356 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 TLX3O43711 291 aaPredicted RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 CNOT3O75175 753 aaKnown RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 RNH1P13489 461 aaKnown RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 TIA1P31483 386 aaKnown RBP eCLIP13.33□□□□□ -0.287e-7■□□□□ 8.5
VPS25-201ENST00000253794 LIM2P55344 173 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 RAB38P57729 211 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 ACSM2AQ08AH3 577 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 CLN3Q13286 438 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 SLC9A5Q14940 896 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 NR6A1Q15406 480 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 NKG7Q16617 165 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 C6orf136Q5SQH8 315 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 ACSM2BQ68CK6 577 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 OGFOD2Q6N063 350 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 FAM199XQ6PEV8 388 aaPredicted RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 LARP4Q71RC2 724 aaKnown RBP eCLIP13.33□□□□□ -0.289e-7■■■■■ 32.5
VPS25-201ENST00000253794 MAVSQ7Z434 540 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 ZC3H7AQ8IWR0 971 aaKnown RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 PARP9Q8IXQ6 854 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 METTL27Q8N6F8 245 aaPredicted RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 ZNF248Q8NDW4 579 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 OR5T3Q8NGG3 340 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 OR51Q1Q8NH59 317 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS25-201ENST00000253794 COL26A1Q96A83 441 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 SPSB2Q99619 263 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 SORBS1Q9BX66 1292 aaKnown RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 NUF2Q9BZD4 464 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 DPH1Q9BZG8 443 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 MS4A12Q9NXJ0 267 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 ASIC5Q9NY37 505 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 ZNF282Q9UDV7 671 aaPredicted RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 MARCOQ9UEW3 520 aaPredicted RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 WBP11Q9Y2W2 641 aaKnown RBP13.33□□□□□ -0.28
VPS25-201ENST00000253794 ASB4Q9Y574 426 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 USH1CQ9Y6N9 552 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 MAU2Q9Y6X3 613 aa13.33□□□□□ -0.28
VPS25-201ENST00000253794 CHD8Q9HCK8 2581 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 APC2O95996 2303 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 LOC101059948A0A1B0GTJ6 334 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 TMEM8BA6NDV4 472 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 ZNF860A6NHJ4 632 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 CYR61O00622 381 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 TMPRSS11DO60235 418 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 DNAJB6O75190 326 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 KLF7O75840 302 aaPredicted RBP13.32□□□□□ -0.28
VPS25-201ENST00000253794 BMP10O95393 424 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 RECKO95980 971 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 PCSK2P16519 638 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 MAT1AQ00266 395 aaKnown RBP13.32□□□□□ -0.28
VPS25-201ENST00000253794 TUBB8Q3ZCM7 444 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 ATP6AP1LQ52LC2 224 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 SPDYAQ5MJ70 313 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 EPGNQ6UW88 154 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 UNQ6494/PRO21346Q6UXR6 183 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 STT3BQ8TCJ2 826 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 ACTRT2Q8TDY3 377 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 MAPKAP1Q9BPZ7 522 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 EFHD1Q9BUP0 239 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 LANCL2Q9NS86 450 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 HCN3Q9P1Z3 774 aa13.32□□□□□ -0.28
VPS25-201ENST00000253794 TRPC4Q9UBN4 977 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms