RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 DCST1Q5T197 706 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 LETMD1Q6P1Q0 360 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SLC16A12Q6ZSM3 486 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 C16orf59Q7L2K0 433 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 LRRC56Q8IYG6 542 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PM20D2Q8IYS1 436 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 CNIH3Q8TBE1 160 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 DNAJA4Q8WW22 397 aaPredicted RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NAA50Q9GZZ1 169 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 CALML5Q9NZT1 146 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 VPS29Q9UBQ0 182 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 PSORS1C1Q9UIG5 152 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NDRG4Q9ULP0 352 aaKnown RBP3.99□□□□□ -1.77
UBE4A-201ENST00000252108 NCKAP1Q9Y2A7 1128 aa3.99□□□□□ -1.77
UBE4A-201ENST00000252108 SLC38A8A6NNN8 435 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 FAAHO00519 579 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CCL22O00626 93 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ALDH2P05091 517 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 BCKDHAP12694 445 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 RHCEP18577 417 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CRATP43155 626 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 MLLT10P55197 1068 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 WNT3P56703 355 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CPSF6Q16630 551 aaKnown RBP eCLIP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 C6orf132Q5T0Z8 1188 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF57Q68EA5 555 aaPredicted RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 LDB1Q86U70 411 aaPredicted RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 NOXA1Q86UR1 476 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 SERPINA9Q86WD7 417 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 SLC34A3Q8N130 599 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CLDN22Q8N7P3 220 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 NDNFQ8TB73 568 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TEX47Q8TBZ9 253 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 EEF1AKMT1Q8WVE0 214 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TTC9Q92623 222 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 RNFT2Q96EX2 444 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM169Q96HH4 297 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TSSK3Q96PN8 268 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 MGLLQ99685 303 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 USB1Q9BQ65 265 aaKnown RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 EFCAB11Q9BUY7 163 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ASPNQ9BXN1 380 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 BHLHE41Q9C0J9 482 aaPredicted RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ACTR6Q9GZN1 396 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 HDHD2Q9H0R4 259 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 FAM83DQ9H4H8 585 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 FKBP14Q9NWM8 211 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 GIMAP2Q9UG22 337 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 USP22Q9UPT9 525 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 H3BN98 237 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TLR4O00206 839 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 XPNPEP2O43895 674 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 LILRB5O75023 590 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 C1QCP02747 245 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 POU1F1P28069 291 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ETV6P41212 452 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 SLC9A3P48764 834 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 GP2P55259 537 aaKnown RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TGM3Q08188 693 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ADAM15Q13444 863 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CDK10Q15131 360 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CTF1Q16619 201 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TBRG1Q3YBR2 411 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CCNJQ5T5M9 372 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM236Q5W0B7 351 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 ENPP6Q6UWR7 440 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 MACC1Q6ZN28 852 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 SZRD1Q7Z422 152 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CAMKMTQ7Z624 323 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CIR1Q86X95 450 aaPredicted RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 NPAS3Q8IXF0 933 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 OR8J1Q8NGP2 316 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 APOLD1Q96LR9 279 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CSF3RQ99062 836 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 RAD9AQ99638 391 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 C7orf50Q9BRJ6 194 aaKnown RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 UCK2Q9BZX2 261 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CIPCQ9C0C6 399 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 CRISPLD2Q9H0B8 497 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 BRF2Q9HAW0 419 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 GPRC5BQ9NZH0 403 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TBC1D14Q9P2M4 693 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 MAFFQ9ULX9 164 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 PADI2Q9Y2J8 665 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 SNX8Q9Y5X2 465 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 WASH3PC4AMC7 463 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TNFRSF10AO00220 468 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TLR5O60602 858 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 NIPSNAP2O75323 286 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 PRAMEF1O95521 474 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TBX6O95947 436 aaPredicted RBP3.98□□□□□ -1.77
UBE4A-201ENST00000252108 HLA-DPB1P04440 258 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 HLA-DMAP28067 261 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 MAP2K3P46734 347 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 LIMS1P48059 325 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 NCS1P62166 190 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TAF10Q12962 218 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 TSC22D1Q15714 1073 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 SYT16Q17RD7 645 aa3.98□□□□□ -1.77
UBE4A-201ENST00000252108 HKDC1Q2TB90 917 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms