RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF717Q9BY31 904 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 CCNB1IP1Q9NPC3 277 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 FAIMQ9NVQ4 179 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 PRAMEF33A0A0G2JMD5 474 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 PLPP1O14494 284 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 PRAMEF10O60809 474 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 RB1P06400 928 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 KELP23276 732 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 IL12RB1P42701 662 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 PHEXP78562 749 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 EXOC3L2Q2M3D2 409 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 CRB2Q5IJ48 1285 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 AMZ2Q86W34 360 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 HEATR4Q86WZ0 1026 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 ADGRF3Q8IZF5 1079 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 ZNF347Q96SE7 839 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 MIEF1Q9NQG6 463 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 THSD1Q9NS62 852 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 TAC3Q9UHF0 121 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 COL4A3Q01955 1670 aa18.66■□□□□ 0.58
CDC42EP1-201ENST00000249014 RTCAO00442 366 aaKnown RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 PCBP3P57721 371 aaKnown RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 CYP4F2P78329 520 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 CNTN1Q12860 1018 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 EIF4HQ15056 248 aaKnown RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 IKBIPQ70UQ0 350 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ADGRD2Q7Z7M1 963 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 P2RY8Q86VZ1 359 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 DCUN1D3Q8IWE4 304 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ANKRD53Q8N9V6 530 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ASB16Q96NS5 453 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ABCG4Q9H172 646 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 EPS8L2Q9H6S3 715 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 CXorf36Q9H7Y0 433 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 CUEDC1Q9NWM3 386 aaPredicted RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 NUMA1Q14980 2115 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 LCKP06239 509 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ARAFP10398 606 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 GGT2P36268 569 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 VBP1P61758 197 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ELOAQ14241 798 aaKnown RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 NR1D2Q14995 579 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 MICAQ29983 383 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 ZNF630Q2M218 657 aaPredicted RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 LGI4Q8N135 537 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 KRT78Q8N1N4 520 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 SVOPQ8N4V2 548 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 IPCEF1Q8WWN9 437 aaPredicted RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 SH3YL1Q96HL8 342 aaPredicted RBP18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 BCL7BQ9BQE9 202 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 SLAMF7Q9NQ25 335 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 HCN2Q9UL51 889 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 PCDHGA2Q9Y5H1 932 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 TRPM6Q9BX84 2022 aa18.65■□□□□ 0.58
CDC42EP1-201ENST00000249014 C5orf67F2Z3F1 127 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 TOR1BO14657 336 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 SLC22A1O15245 554 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 MRPS14O60783 128 aaKnown RBP18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 RECKO95980 971 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PCCBP05166 539 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 ERGP11308 486 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PSMB5P28074 263 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 IDUAP35475 653 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PXNP49023 591 aaPredicted RBP18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 ST13P50502 369 aaKnown RBP18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 MVKQ03426 396 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 CYP2A13Q16696 494 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PNCKQ6P2M8 343 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 SLCO6A1Q86UG4 719 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 CCDC103Q8IW40 242 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 OR9Q2Q8NGE9 314 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 ALOXE3Q9BYJ1 711 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PALMDQ9NP74 551 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 NECTIN3Q9NQS3 549 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 SH3GLB1Q9Y371 365 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 SNX8Q9Y5X2 465 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 OR2A25A4D2G3 310 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 KRT75O95678 551 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PIP5KL1Q5T9C9 394 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 ADAMTSL4Q6UY14 1074 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 BTLAQ7Z6A9 289 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 IGFN1Q86VF2 1251 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 C17orf64Q86WR6 236 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 CACUL1Q86Y37 369 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 KIAA1958Q8N8K9 716 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 OR5K2Q8NHB8 316 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 F2RL3Q96RI0 385 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 MENTQ9BUN1 341 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 PRSS16Q9NQE7 514 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 RAB23Q9ULC3 237 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 ICKQ9UPZ9 632 aa18.64■□□□□ 0.57
CDC42EP1-201ENST00000249014 FEZF1A0PJY2 475 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 TBC1D3BA6NDS4 549 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 POU2F2P09086 479 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 UQCRC2P22695 453 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 XCR1P46094 333 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 NCS1P62166 190 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 RPS26P62854 115 aaKnown RBP18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 CDK3Q00526 305 aa18.63■□□□□ 0.57
CDC42EP1-201ENST00000249014 RPA4Q13156 261 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms