RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 YKT6O15498 198 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 SCN2BO60939 215 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 DRD2P14416 443 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 HTR1EP28566 365 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 HOXD12P35452 270 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 CDKN2CP42773 168 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ARF3P61204 181 aaPredicted RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 GTDC1Q4AE62 458 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 MANEAQ5SRI9 462 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 PACS2Q86VP3 889 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 CLECL1Q8IZS7 167 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 TRIML2Q8N7C3 387 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 C19orf47Q8N9M1 422 aaKnown RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 KCT2Q8NC54 265 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 PYDC1Q8WXC3 89 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 NCSTNQ92542 709 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 TRAPPC9Q96Q05 1148 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 AICDAQ9GZX7 198 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 PIF1Q9H611 641 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 STX18Q9P2W9 335 aaKnown RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 NKX1-2Q9UD57 310 aaPredicted RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 EGFL7Q9UHF1 273 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 BAG2O95816 211 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 B3GALT4O96024 378 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ZNF888P0CJ79 500 aaPredicted RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ST6GAL1P15907 406 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 GLB1P16278 677 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 EFNA1P20827 205 aaPredicted RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 EPHA8P29322 1005 aaPredicted RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 SELPLGQ14242 412 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 MAP7Q14244 749 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ZNF385BQ569K4 471 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 FRMPD2BQ6IN97 320 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ZFP1Q6P2D0 407 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ZNF793Q6ZN11 406 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 FAM92BQ6ZTR7 304 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 PROSER1Q86XN7 944 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 MSRB3Q8IXL7 192 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 OR10A6Q8NH74 314 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 EPB41L1Q9H4G0 881 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 LYARQ9NX58 379 aaKnown RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 NLGN3Q9NZ94 848 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ACTR3BQ9P1U1 418 aa17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 ZNF282Q9UDV7 671 aaPredicted RBP17.8■□□□□ 0.44
TNFSF9-201ENST00000245817 DMDP11532 3685 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 LOC105369274A0A096LPK9 316 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 TRBV5-3A0A0A0MS03 114 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 LOC102723532A0A0G2JNH3 316 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 A0A1B0GTQ1 180 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 A0A1W2PRB8 838 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SLC9B1P1A6NJY1 282 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 GSTA4O15217 222 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 TBX19O60806 448 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 PRAMEF10O60809 474 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 ABCB1P08183 1280 aaPredicted RBP17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 PPIBP23284 216 aaKnown RBP17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SHBQ15464 509 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 HLA-BQ31612 363 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 NDUFAF5Q5TEU4 345 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 CYP2R1Q6VVX0 501 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SLC35F3Q8IY50 421 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 OR4N4Q8N0Y3 316 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 AMER3Q8N944 861 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 FAM47BQ8NA70 645 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 ZBTB44Q8NCP5 570 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 UTP15Q8TED0 518 aaKnown RBP17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 FAM120BQ96EK7 910 aaKnown RBP17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 TCTN2Q96GX1 697 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 TGM7Q96PF1 710 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 MAP3K3Q99759 626 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SYNPO2LQ9H987 977 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SLC6A13Q9NSD5 602 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 GMPR2Q9P2T1 348 aaKnown RBP17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 STOML1Q9UBI4 398 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 FBXW2Q9UKT8 454 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 CORO2BQ9UQ03 480 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SNX13Q9Y5W8 968 aa17.79■□□□□ 0.44
TNFSF9-201ENST00000245817 SDK1Q7Z5N4 2213 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 CLIC1O00299 241 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 TXNDC9O14530 226 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 ZCCHC18P0CG32 403 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 CERS1P27544 350 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 GPR3P46089 330 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 VSX2P58304 361 aaPredicted RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 MRPS22P82650 360 aaKnown RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 SLC34A1Q06495 639 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 MUM1Q2TAK8 710 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 PEAR1Q5VY43 1037 aaPredicted RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 ZCCHC8Q6NZY4 707 aaKnown RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 MMP21Q8N119 569 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 CSNK1A1LQ8N752 337 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 OR2T12Q8NG77 320 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 ZCCHC10Q8TBK6 192 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 CIDECQ96AQ7 238 aaPredicted RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 AURKBQ96GD4 344 aaPredicted RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 CD180Q99467 661 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 CPPED1Q9BRF8 314 aaPredicted RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 RAB33BQ9H082 229 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 TEX10Q9NXF1 929 aaPredicted RBP17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 PADI4Q9UM07 663 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms