RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PNCKQ6P2M8 343 aa20.97■□□□□ 0.95
RNF39-201ENST00000244360 TMIGD1Q6UXZ0 262 aa20.97■□□□□ 0.95
RNF39-201ENST00000244360 ZNF852Q6ZMS4 543 aa20.97■□□□□ 0.95
RNF39-201ENST00000244360 SFXN1Q9H9B4 322 aa20.97■□□□□ 0.95
RNF39-201ENST00000244360 DOLKQ9UPQ8 538 aa20.97■□□□□ 0.95
RNF39-201ENST00000244360 LAMA3Q16787 3333 aa20.97■□□□□ 0.95
RNF39-201ENST00000244360 TBC1D3BA6NDS4 549 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 C9P02748 559 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 MT-ND2P03891 347 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 PTX3P26022 381 aaPredicted RBP20.96■□□□□ 0.95
RNF39-201ENST00000244360 C2orf80Q0P641 193 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 ELOAQ14241 798 aaKnown RBP20.96■□□□□ 0.95
RNF39-201ENST00000244360 COX20Q5RI15 118 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 HEATR4Q86WZ0 1026 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 FCGR1BQ92637 280 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 TPD52L3Q96J77 140 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 NEURL2Q9BR09 285 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 SLC35A5Q9BS91 424 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 MTIF3Q9H2K0 278 aaKnown RBP20.96■□□□□ 0.95
RNF39-201ENST00000244360 ACOT13Q9NPJ3 140 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 THUMPD1Q9NXG2 353 aaKnown RBP20.96■□□□□ 0.95
RNF39-201ENST00000244360 GDE1Q9NZC3 331 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 SLC23A2Q9UGH3 650 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 PRKAB1Q9Y478 270 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 NADKO95544 446 aaPredicted RBP20.96■□□□□ 0.95
RNF39-201ENST00000244360 PSMB9P28065 219 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 MAP2K4P45985 399 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 TAS2R50P59544 299 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 FADDQ13158 208 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 ARHGAP19Q14CB8 494 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 KRT78Q8N1N4 520 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 ATG16L2Q8NAA4 619 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 DYNC2LI1Q8TCX1 351 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 CIDECQ96AQ7 238 aaPredicted RBP20.96■□□□□ 0.95
RNF39-201ENST00000244360 TAMM41Q96BW9 452 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 TMEM38AQ9H6F2 299 aa20.96■□□□□ 0.95
RNF39-201ENST00000244360 KLK1P06870 262 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 EPHX1P07099 455 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 ETFAP13804 333 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 MASP1P48740 699 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 CDK3Q00526 305 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 CYP2A13Q16696 494 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 DUSP6Q16828 381 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 GCNT6Q5T4J0 391 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 CCDC81Q6ZN84 652 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 TSEN54Q7Z6J9 526 aaKnown RBP20.95■□□□□ 0.94
RNF39-201ENST00000244360 OR6Q1Q8NGQ2 317 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 NDNFQ8TB73 568 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 TFGQ92734 400 aaPredicted RBP20.95■□□□□ 0.94
RNF39-201ENST00000244360 RHBGQ9H310 441 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 PELI2Q9HAT8 420 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 TRNAU1APQ9NX07 287 aaKnown RBP20.95■□□□□ 0.94
RNF39-201ENST00000244360 RAPGEFL1Q9UHV5 662 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 PLAGL1Q9UM63 463 aa20.95■□□□□ 0.94
RNF39-201ENST00000244360 CLDN24A6NM45 220 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 ATP6V1G1O75348 118 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 TPP2P29144 1249 aaPredicted RBP20.94■□□□□ 0.94
RNF39-201ENST00000244360 DRD3P35462 400 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 CRATP43155 626 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 MAGEA8P43361 318 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 SELENOWP63302 87 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 EEF1A2Q05639 463 aaKnown RBP20.94■□□□□ 0.94
RNF39-201ENST00000244360 PRSS53Q2L4Q9 553 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 IER5LQ5T953 404 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 FAM46CQ5VWP2 391 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 CCDC80Q76M96 950 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 SLC9B2Q86UD5 537 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 LRRTM4Q86VH4 590 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.94■□□□□ 0.94
RNF39-201ENST00000244360 DNMT3AQ9Y6K1 912 aaPredicted RBP20.94■□□□□ 0.94
RNF39-201ENST00000244360 ANTXRLA6NF34 631 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 CA3P07451 260 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 AQP1P29972 269 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 METRNLQ641Q3 311 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 ST13P5Q8NFI4 369 aaPredicted RBP20.94■□□□□ 0.94
RNF39-201ENST00000244360 OR5K2Q8NHB8 316 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 GABARAPL3Q9BY60 117 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 C1GALT1Q9NS00 363 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 TAS2R9Q9NYW1 312 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 PCDHGB3Q9Y5G1 929 aa20.94■□□□□ 0.94
RNF39-201ENST00000244360 SEMA3DO95025 777 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 FADS2O95864 444 aaKnown RBP20.93■□□□□ 0.94
RNF39-201ENST00000244360 TBX6O95947 436 aaPredicted RBP20.93■□□□□ 0.94
RNF39-201ENST00000244360 IL3P08700 152 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 HSD17B2P37059 387 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 NPRL3Q12980 569 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 CAMK2GQ13555 558 aaPredicted RBP20.93■□□□□ 0.94
RNF39-201ENST00000244360 WSCD2Q2TBF2 565 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 LAIR1Q6GTX8 287 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 VITQ6UXI7 678 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 GET4Q7L5D6 327 aaPredicted RBP20.93■□□□□ 0.94
RNF39-201ENST00000244360 MFSD4AQ8N468 514 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 MENTQ9BUN1 341 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 WASH6PQ9NQA3 447 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 RPN2P04844 631 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 PCCBP05166 539 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 KRT20P35900 424 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 TAS2R38P59533 333 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 UBE2UQ5VVX9 321 aa20.93■□□□□ 0.94
RNF39-201ENST00000244360 TANGO2Q6ICL3 276 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms