RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 LGI4Q8N135 537 aa13.6□□□□□ -0.23
PCDHB3-201ENST00000231130 LINC00469Q8N7U9 141 aa13.6□□□□□ -0.23
PCDHB3-201ENST00000231130 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
PCDHB3-201ENST00000231130 MGME1Q9BQP7 344 aa13.6□□□□□ -0.23
PCDHB3-201ENST00000231130 TRPV2Q9Y5S1 764 aa13.6□□□□□ -0.23
PCDHB3-201ENST00000231130 A3GALT2U3KPV4 340 aa13.6□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 LOC102723532A0A0G2JNH3 316 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 GPC1P35052 558 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 MAN2A2P49641 1150 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 MAP2K6P52564 334 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 ERVFC1P60507 584 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 DUSP4Q13115 394 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF177Q13360 481 aaPredicted RBP13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 UGT8Q16880 541 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 TMEM81Q6P7N7 255 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 ZBTB2Q8N680 514 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 HRASLS5Q96KN8 279 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 MS4A7Q9GZW8 240 aaPredicted RBP13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 LIN7BQ9HAP6 207 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 PRKAB1Q9Y478 270 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 HSPE1-MOB4S4R3N1 261 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 CCDC88CQ9P219 2028 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 KPNA5O15131 536 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 MTX2O75431 263 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 MAGEA2P43356 314 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 EXOC3L2Q2M3D2 409 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 LCN1P1Q5VSP4 162 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 PTCHD4Q6ZW05 846 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 CARNMT1Q8N4J0 409 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 OR5AK3PQ8NH89 298 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 NIPAL2Q9H841 368 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 COMMD3Q9UBI1 195 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 A0A0C4DFX4 3053 aa13.59□□□□□ -0.23
PCDHB3-201ENST00000231130 GPX5O75715 221 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 GJB5O95377 273 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 ANXA5P08758 320 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 MAP2K3P46734 347 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 RORCP51449 518 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 TEKQ02763 1124 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 CACNG1Q06432 222 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 ZNF33BQ06732 778 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 TBCEQ15813 527 aaPredicted RBP13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 AANATQ16613 207 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 LEXMQ3ZCV2 418 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 SHEQ5VZ18 495 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 LAMTOR1Q6IAA8 161 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 PTOV1Q86YD1 416 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 NAGSQ8N159 534 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 HYLS1Q96M11 299 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 QRFPRQ96P65 431 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 CLEC2DQ9UHP7 191 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.23
PCDHB3-201ENST00000231130 YY2O15391 372 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 PCDH7O60245 1069 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 CDRT1O95170 752 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 ADRA2AP08913 450 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 ALAS2P22557 587 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 PTPN6P29350 595 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 CPT1AP50416 773 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 SRP54P61011 504 aaKnown RBP13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 ADNP2Q6IQ32 1131 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 NOXRED1Q6NXP6 359 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 RASSF6Q6ZTQ3 369 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 CEP76Q8TAP6 659 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 DNAJC27Q9NZQ0 273 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 IGLV3-10A0A075B6K4 115 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 A0A1W2PQL4 384 aaPredicted RBP13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 PCDH17O14917 1159 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 LRRTM2O43300 516 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 RFPL3O75679 317 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 TOXO94900 526 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 EBLN1P0CF75 366 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 GGT2P36268 569 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 OLR1P78380 273 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 DOC2BQ14184 412 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 ZNF79Q15937 498 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 TCTE3Q8IZS6 198 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 TAGAPQ8N103 731 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 LRRC17Q8N6Y2 441 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 DCLRE1CQ96SD1 692 aaKnown RBP13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 ACSL6Q9UKU0 697 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 CMAHPQ9Y471 501 aa13.58□□□□□ -0.24
PCDHB3-201ENST00000231130 PRAMEF33A0A0G2JMD5 474 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 GNG14A0A1W2PPG7 69 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 PRAMEF10O60809 474 aa13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 IGFBP1P08833 259 aaPredicted RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
PCDHB3-201ENST00000231130 DUOXA1Q1HG43 343 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms