RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 GCM2O75603 506 aaPredicted RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 OR7A10O76100 309 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 LGI1O95970 557 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 GSTM1P09488 218 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 DDX5P17844 614 aaKnown RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 EPORP19235 508 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 OR1G1P47890 313 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 ZXDBP98169 803 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 MAB21L1Q13394 359 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 DNAJC5GQ8N7S2 189 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 ZC3HAV1LQ96H79 300 aaKnown RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 C17orf62Q9BQA9 187 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 CINPQ9BW66 212 aaPredicted RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 RACGAP1Q9H0H5 632 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 CHST8Q9H2A9 424 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 NDUFB11Q9NX14 153 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 ABI2Q9NYB9 513 aaPredicted RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 TBX21Q9UL17 535 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 FZD4Q9ULV1 537 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 CLCA3PQ9Y6N3 262 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 MYL12BO14950 172 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 MYL12AP19105 171 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 HOXD9P28356 352 aaPredicted RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 MAPKAPK2P49137 400 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 CCL23P55773 120 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 RRAS2P62070 204 aaPredicted RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 SDHAF4Q5VUM1 108 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 C9orf62Q8N4C0 152 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 OR8H1Q8NGG4 311 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 GTPBP3Q969Y2 492 aaKnown RBP16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 EBPLQ9BY08 206 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 C12orf4Q9NQ89 552 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 POLHQ9Y253 713 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 PCDHB11Q9Y5F2 797 aa16.95■□□□□ 0.3
CDKN1B-201ENST00000228872 WASHC1A8K0Z3 465 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 H7C0S8 307 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PLD2O14939 933 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 MPZL2O60487 215 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 TPST2O60704 377 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 STK16O75716 305 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 OPN1SWP03999 348 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 HMBSP08397 361 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 HLA-EP13747 358 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 RPS3P23396 243 aaKnown RBP eCLIP16.94■□□□□ 0.36e-12■■■■□ 19.6
CDKN1B-201ENST00000228872 MAN2A2P49641 1150 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 SELENOWP63302 87 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 ZBTB37Q5TC79 503 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 MON1AQ86VX9 555 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 NPAS4Q8IUM7 802 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC34A3Q8N130 599 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 DNAJA4Q8WW22 397 aaPredicted RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 B3GALT6Q96L58 329 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PSKH2Q96QS6 385 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 MRPL9Q9BYD2 267 aaKnown RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 ELOVL6Q9H5J4 265 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 RBFOX1Q9NWB1 397 aaKnown RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 FTSJ1Q9UET6 329 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PCDHGC4Q9Y5F7 938 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 ZAR1LA6NP61 321 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 A8MVJ9 347 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 YY2O15391 372 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 TSC22D2O75157 780 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 ENTPD6O75354 484 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 OAZ2O95190 189 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 TBX18O95935 607 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 IL1AP01583 271 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 MSL3P1P0C860 447 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 FAM157BP0CG42 384 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 AMD1P17707 334 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PRPS1L1P21108 318 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PRPH2P23942 346 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 CNR2P34972 360 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 PCGF2P35227 344 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 OR1E2P47887 323 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 SRSF11Q05519 484 aaKnown RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 DDI2Q5TDH0 399 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 CLDN22Q8N7P3 220 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 DUSP18Q8NEJ0 188 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 ATP6V1C2Q8NEY4 427 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 OR7D4Q8NG98 312 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 UPRTQ96BW1 309 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 TMEM80Q96HE8 168 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 DCLRE1CQ96SD1 692 aaKnown RBP16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 FAM129BQ96TA1 746 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 MAPKAP1Q9BPZ7 522 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 SPATA9Q9BWV2 254 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC25A19Q9HC21 320 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 AUP1Q9Y679 476 aa16.94■□□□□ 0.3
CDKN1B-201ENST00000228872 SYN3O14994 580 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 TNFRSF21O75509 655 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC22A5O76082 557 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC9A3P48764 834 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 CLDN20P56880 219 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 CACNG1Q06432 222 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 NOXRED1Q6NXP6 359 aa16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 METTL2BQ6P1Q9 378 aaKnown RBP16.93■□□□□ 0.3
CDKN1B-201ENST00000228872 HSDL2Q6YN16 418 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms