RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 CXorf57Q6NSI4 855 aaKnown RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 LINGO4Q6UY18 593 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 ZNF767PQ75MW2 155 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 KCTD20Q7Z5Y7 419 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
SF1-201ENST00000227503 GPR65Q8IYL9 337 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 LKAAEAR1Q8TD35 194 aa13.52□□□□□ -0.25
SF1-201ENST00000227503 MANBAO00462 879 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 YY2O15391 372 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 ETV3P41162 512 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 CRYBB2P43320 205 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 ATN1P54259 1190 aaPredicted RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 CACNG1Q06432 222 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 CSTF3Q12996 717 aaKnown RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 WSCD2Q2TBF2 565 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 RNF219Q5W0B1 726 aaPredicted RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 CBLL1Q75N03 491 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 CHST9Q7L1S5 443 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 BBS7Q8IWZ6 715 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 STK40Q8N2I9 435 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 MTERF3Q96E29 417 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 APIPQ96GX9 242 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 ZIC5Q96T25 663 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 SPATA9Q9BWV2 254 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 TAPBPLQ9BX59 468 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 AFF4Q9UHB7 1163 aaKnown RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 PCDH17O14917 1159 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 NUPL2O15504 423 aaKnown RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 FABP7O15540 132 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 CSO75390 466 aaKnown RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 SYPP08247 313 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 NAT2P11245 290 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
SF1-201ENST00000227503 SDC1P18827 310 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 SSTR2P30874 369 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 GATMP50440 423 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 SMSP52788 366 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 DGKKQ5KSL6 1271 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 PTCHD4Q6ZW05 846 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 CREB3L2Q70SY1 520 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 C16orf59Q7L2K0 433 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 C9orf62Q8N4C0 152 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 TOR1AIP2Q8NFQ8 470 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 BOCQ9BWV1 1114 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 PRM3Q9NNZ6 103 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 B3GAT2Q9NPZ5 323 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 GKN1Q9NS71 199 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 LHX3Q9UBR4 397 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 RPS6KA6Q9UK32 745 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
SF1-201ENST00000227503 A0A1B0GVM2 712 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 FAM240BA0A1B0GVZ2 78 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 PDPK1O15530 556 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 COCHO43405 550 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 FZD6O60353 706 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 SOX14O95416 240 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 IL1RNP18510 177 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 MAP2K3P46734 347 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 SLC11A1P49279 550 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 CSNK2BP67870 215 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 PTGES3Q15185 160 aaKnown RBP13.5□□□□□ -0.25
SF1-201ENST00000227503 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 FUT10Q6P4F1 479 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 TAS1R1Q7RTX1 841 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 WBP2Q969T9 261 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 COPS8Q99627 209 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 CWH43Q9H720 699 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 OR5K3A6NET4 321 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 E9PQ18 207 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 ENTPD6O75354 484 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 STC2O76061 302 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 SLC22A5O76082 557 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 HBQ1P09105 142 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 CORO1AP31146 461 aaKnown RBP13.5□□□□□ -0.25
SF1-201ENST00000227503 SDC2P34741 201 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 CNR2P34972 360 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 STK11Q15831 433 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 ZBTB37Q5TC79 503 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 ANKRD54Q6NXT1 300 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 PHC2Q8IXK0 858 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 SLC37A3Q8NCC5 494 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 RIT1Q92963 219 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 QRFPRQ96P65 431 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 ING3Q9NXR8 418 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 NDUFAF4Q9P032 175 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 PCDHB1Q9Y5F3 818 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
SF1-201ENST00000227503 TMEM229AB2RXF0 380 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 NCR1O76036 304 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 CCNB2O95067 398 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 MSL3P1P0C860 447 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 HLA-EP13747 358 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 ARHGEF7Q14155 803 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 FRMPD2BQ6IN97 320 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 C19orf48Q6RUI8 117 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 C16orf62Q7Z3J2 963 aa13.5□□□□□ -0.25
SF1-201ENST00000227503 KRT73Q86Y46 540 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms