RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ARL9Q6T311 187 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 LINGO2Q7L985 606 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 ASB9Q96DX5 294 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 SCRN2Q96FV2 425 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 GFM1Q96RP9 751 aaKnown RBP17.75■□□□□ 0.43
CLIP2-201ENST00000223398 UCK2Q9BZX2 261 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 PPP4R1LQ9P1A2 415 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 MYOGP15173 224 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 GSTM3P21266 225 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 CYBRD1Q53TN4 286 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 FIGLAQ6QHK4 219 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 CRYGNQ8WXF5 182 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 MEAF6Q9HAF1 191 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 COMMD3Q9UBI1 195 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 AQP12BA6NM10 295 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 TRMUO75648 421 aaKnown RBP17.75■□□□□ 0.43
CLIP2-201ENST00000223398 CSTAP01040 98 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 RAB28P51157 221 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 ARHGDIBP52566 201 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 RPS15AP62244 130 aaKnown RBP17.75■□□□□ 0.43
CLIP2-201ENST00000223398 SIM1P81133 766 aaPredicted RBP17.75■□□□□ 0.43
CLIP2-201ENST00000223398 CARD17Q5XLA6 110 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 AQP12AQ8IXF9 295 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 DAZLQ92904 295 aaKnown RBP17.75■□□□□ 0.43
CLIP2-201ENST00000223398 PYURFQ96I23 114 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 TOX2Q96NM4 488 aa17.75■□□□□ 0.43
CLIP2-201ENST00000223398 J3QLW9 94 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 CSN2P05814 226 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF19P17023 458 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 P2RY2P41231 377 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 NOVP48745 357 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ABATP80404 500 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 PDCD4Q53EL6 469 aaKnown RBP17.74■□□□□ 0.43
CLIP2-201ENST00000223398 NIPAL1Q6NVV3 410 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ANKFN1Q8N957 763 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 MGME1Q9BQP7 344 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 OR52A4PA6NMU1 304 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 SHC2P98077 582 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 REEP3Q6NUK4 255 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 NXPE4Q6UWF7 544 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ZBTB26Q9HCK0 441 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 UQCRC2P22695 453 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 STARP49675 285 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 RPS26P62854 115 aaKnown RBP17.74■□□□□ 0.43
CLIP2-201ENST00000223398 DSC1Q08554 894 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 NSDHLQ15738 373 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 RPF2Q9H7B2 306 aaKnown RBP17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF334Q9HCZ1 680 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-201ENST00000223398 HRH2P25021 359 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 SMSP52788 366 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ERVFC1P60507 584 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 SLC3A1Q07837 685 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 TECRLQ5HYJ1 363 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 RAET1LQ5VY80 246 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 PM20D1Q6GTS8 502 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 GJD2Q9UKL4 321 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 PCDHB14Q9Y5E9 798 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 SPO11Q9Y5K1 396 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 A0A1W2PRG6 482 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 TLX2O43763 284 aaPredicted RBP17.74■□□□□ 0.43
CLIP2-201ENST00000223398 RFPL1O75677 317 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 PROS1P07225 676 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 CLRN1P58418 232 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ABHD18Q0P651 414 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ARFRP1Q13795 201 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ABRAXAS2Q15018 415 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 PON3Q15166 354 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 LYSMD4Q5XG99 296 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 FAM180BQ6P0A1 224 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF101Q8IZC7 436 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 TTYH2Q9BSA4 534 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 RNF38Q9H0F5 515 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 SAGE1Q9NXZ1 904 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 ING4Q9UNL4 249 aa17.74■□□□□ 0.43
CLIP2-201ENST00000223398 TIA1P31483 386 aaKnown RBP eCLIP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 PMS2P3Q13401 168 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 GRB7Q14451 532 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 TMEM44Q2T9K0 475 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 ZC3H14Q6PJT7 736 aaKnown RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 CNDP2Q96KP4 475 aaKnown RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 KLF16Q9BXK1 252 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 ZNF576Q9H609 170 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 ADAMTS4O75173 837 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 MAOBP27338 520 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 PLET1Q6UQ28 207 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 GALNT12Q8IXK2 581 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 BIRC7Q96CA5 298 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 PHF12Q96QT6 1004 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 POFUT2Q9Y2G5 429 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 SLC35F4A4IF30 521 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 ALDOAP04075 364 aaKnown RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 CST5P28325 142 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 NLGN4YQ8NFZ3 816 aaPredicted RBP17.73■□□□□ 0.43
CLIP2-201ENST00000223398 OR5AR1Q8NGP9 310 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 RBP7Q96R05 134 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 RANBP9Q96S59 729 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 NELL2Q99435 816 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 FBRSQ9HAH7 460 aa17.73■□□□□ 0.43
CLIP2-201ENST00000223398 SCN11AQ9UI33 1791 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms