RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DPPA4Q7L190 304 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 CALHM3Q86XJ0 350 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 PJA1Q8NG27 643 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 OR5AR1Q8NGP9 310 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF675Q8TD23 568 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 CNDP2Q96KP4 475 aaKnown RBP14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 ACOT13Q9NPJ3 140 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 TVP23BQ9NYZ1 205 aa14.33□□□□□ -0.12
UBE2D4-201ENST00000222402 ANKRD33BA6NCL7 494 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ISM1B1AKI9 464 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 RNASET2O00584 256 aaKnown RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 NME6O75414 186 aaPredicted RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 RB1P06400 928 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ACPPP15309 386 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 DEPDC1Q5TB30 811 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 SLCO4C1Q6ZQN7 724 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 DCUN1D3Q8IWE4 304 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 TOR4AQ9NXH8 423 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 TMEFF2Q9UIK5 374 aaPredicted RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 FEZF1A0PJY2 475 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 FUOMA2VDF0 154 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 GLOD5A6NK44 160 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 PRSS23O95084 383 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ALPPL2P10696 532 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 CD22P20273 847 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 CCR8P51685 355 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 EMP3P54852 163 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 GP2P55259 537 aaKnown RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ATAD3BQ5T9A4 648 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 KDM4DQ6B0I6 523 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 XAF1Q6GPH4 301 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 USP43Q70EL4 1123 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 LRRTM4Q86VH4 590 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC22A16Q86VW1 577 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF300Q96RE9 604 aaPredicted RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 PIP5K1AQ99755 562 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 KCNS3Q9BQ31 491 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 KLHL28Q9NXS3 571 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 FBXW2Q9UKT8 454 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 EDDM13A0A1B0GTR0 161 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 J3KTA2 159 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 GPR37L1O60883 481 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 TSPAN19P0C672 248 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 MRPS15P82914 257 aaKnown RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 HENMT1Q5T8I9 393 aaKnown RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 NIPAL1Q6NVV3 410 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 PSRC1Q6PGN9 363 aaPredicted RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF852Q6ZMS4 543 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 NUDT13Q86X67 352 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 NACC2Q96BF6 587 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 DTD2Q96FN9 168 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 SNTNA6NMZ2 147 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 WASH3PC4AMC7 463 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 CYP7B1O75881 506 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC16A1P53985 500 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 CDKN3Q16667 212 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 TSTQ16762 297 aaKnown RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 C10orf62Q5T681 223 aaPredicted RBP14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 ADIPOR2Q86V24 386 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 PTOV1Q86YD1 416 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC35G5Q96KT7 338 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 DNAJC27Q9NZQ0 273 aa14.32□□□□□ -0.12
UBE2D4-201ENST00000222402 GADD45AP24522 165 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 MXD1Q05195 221 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 KRR1Q13601 381 aaKnown RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 TCEAL5Q5H9L2 206 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 Q6ZNX1 250 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 EPYCQ99645 322 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 CNPPD1Q9BV87 410 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 PRDM8Q9NQV8 689 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 CLCA2Q9UQC9 943 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 LOC110117498-PIK3R3F6TDL0 507 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 ASNA1O43681 348 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 PRAMEF4O60810 478 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 CXCR4P61073 352 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 KCNC4Q03721 635 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 COL9A2Q14055 689 aaPredicted RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 RPS26P11Q5JNZ5 115 aaPredicted RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 TPRG1LQ5T0D9 272 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 PRAMEF9Q5VWM5 478 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 ANKRD33Q7Z3H0 272 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 OR4K3Q96R72 315 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 MIR1-1HGQ9H1L0 117 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 XKR8Q9H6D3 395 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 SPATA6Q9NWH7 488 aaPredicted RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 CORINQ9Y5Q5 1042 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 MICAL3Q7RTP6 2002 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 PCDHGA12O60330 932 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 C1QCP02747 245 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 H1F0P07305 194 aaKnown RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 MAT2AP31153 395 aaKnown RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 CCT3P49368 545 aaKnown RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 FCHO2Q0JRZ9 810 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 TMC8Q8IU68 726 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 EGFL6Q8IUX8 553 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms