RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PPM1AP35813 382 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 PCYT1AP49585 367 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CDK6Q00534 326 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 RBBP4Q09028 425 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 FCHO2Q0JRZ9 810 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 LRRC74AQ0VAA2 488 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 TSTQ16762 297 aaKnown RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 ZNF367Q7RTV3 350 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 COMMD6Q7Z4G1 85 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 GPR65Q8IYL9 337 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 PIP5K1AQ99755 562 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 SLC46A2Q9BY10 475 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 RHCGQ9UBD6 479 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 PCDHGB6Q9Y5F9 930 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 KLK4Q9Y5K2 254 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 KCNE2Q9Y6J6 123 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 PLK4O00444 970 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 ZW10O43264 779 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 ASNA1O43681 348 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CCNB2O95067 398 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 GADD45GO95257 159 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CYP2A6P11509 494 aaPredicted RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 ZNF30P17039 623 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CHI3L1P36222 383 aaPredicted RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 XCR1P46094 333 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 DGKEP52429 567 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 NKX2-5P52952 324 aaPredicted RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 CDC42P60953 191 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 OLR1P78380 273 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 MPEG1Q2M385 716 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CCDC92Q53HC0 331 aaPredicted RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 ZNF362Q5T0B9 420 aaPredicted RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 NLRP8Q86W28 1048 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
USB1-201ENST00000219281 OR2A12Q8NGT7 310 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 WDR48Q8TAF3 677 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 GEMIN6Q8WXD5 167 aaKnown RBP16.53■□□□□ 0.24
USB1-201ENST00000219281 PPCDCQ96CD2 204 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CXorf40BQ96DE9 158 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 EHD1Q9H4M9 534 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 SH2B3Q9UQQ2 575 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 HCN4Q9Y3Q4 1203 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 SNX8Q9Y5X2 465 aa16.53■□□□□ 0.24
USB1-201ENST00000219281 CXCL14O95715 111 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 TGFB1P01137 390 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 PCDH1Q08174 1060 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 C2orf80Q0P641 193 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 SLC5A12Q1EHB4 618 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 CCDC80Q76M96 950 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 ARMCX6Q7L4S7 300 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 GDPD3Q7L5L3 318 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 TMEM25Q86YD3 366 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 KLHDC8AQ8IYD2 350 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 OXR1Q8N573 874 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 TRAM1L1Q8N609 369 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 AQP11Q8NBQ7 271 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.52■□□□□ 0.247e-6■■■■□ 22
USB1-201ENST00000219281 MGLLQ99685 303 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 KCNS3Q9BQ31 491 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 CORO1BQ9BR76 489 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 OR51B5Q9H339 312 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 TMEM38AQ9H6F2 299 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 C11orf49Q9H6J7 331 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 SIAEQ9HAT2 523 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 EHD3Q9NZN3 535 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 RAB23Q9ULC3 237 aa16.52■□□□□ 0.24
USB1-201ENST00000219281 CHD7Q9P2D1 2997 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 TRAV19A0A0A6YYK7 116 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 SLC5A10A0PJK1 596 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 A8MVJ9 347 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 ZNF197O14709 1029 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 KIAA0355O15063 1070 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 KMOO15229 486 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 GPR37L1O60883 481 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 ATG13O75143 517 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 GASTP01350 101 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 C8AP07357 584 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 FURINP09958 794 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 POU1F1P28069 291 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 SOAT1P35610 550 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 SOX6P35712 828 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 CCR2P41597 374 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 GJA8P48165 433 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 EEF1A2Q05639 463 aaKnown RBP16.52■□□□□ 0.23
USB1-201ENST00000219281 DOC2BQ14184 412 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 ELOAQ14241 798 aaKnown RBP16.52■□□□□ 0.23
USB1-201ENST00000219281 SLBPQ14493 270 aaKnown RBP eCLIP16.52■□□□□ 0.23
USB1-201ENST00000219281 PRSS53Q2L4Q9 553 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 HENMT1Q5T8I9 393 aaKnown RBP16.52■□□□□ 0.23
USB1-201ENST00000219281 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 CCBE1Q6UXH8 406 aaPredicted RBP16.52■□□□□ 0.23
USB1-201ENST00000219281 PTCHD4Q6ZW05 846 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 TIFAQ96CG3 184 aa16.52■□□□□ 0.23
USB1-201ENST00000219281 TRBC2A0A5B9 178 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 EFCAB10A6NFE3 127 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 EFCAB14O75071 495 aa16.51■□□□□ 0.23
USB1-201ENST00000219281 LRG1P02750 347 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms