RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TOR3AQ9H497 397 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 SUV39H1O43463 412 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 DPM1O60762 260 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 GCM2O75603 506 aaPredicted RBP28.28■■■□□ 2.12
PABPN1-201ENST00000216727 FKBP9O95302 570 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 VLDLRP98155 873 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 ADPRMQ3LIE5 342 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 GABARAPL1Q9H0R8 117 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 EPS8L2Q9H6S3 715 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 SPHK1Q9NYA1 384 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 ACSL6Q9UKU0 697 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 BAG5Q9UL15 447 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 A0A0A6YYD5 115 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 TRIM64CA6NLI5 447 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 EML2O95834 649 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 AK4P27144 223 aaPredicted RBP28.28■■■□□ 2.12
PABPN1-201ENST00000216727 FRKP42685 505 aaPredicted RBP28.28■■■□□ 2.12
PABPN1-201ENST00000216727 ARFIP1P53367 373 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 RNF130Q86XS8 419 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 TBC1D19Q8N5T2 526 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 FAM3CQ92520 227 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 TSC22D3Q99576 134 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 VNN3Q9NY84 501 aa28.28■■■□□ 2.12
PABPN1-201ENST00000216727 PDPK1O15530 556 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 CMPK1P30085 196 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 AKT2P31751 481 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 RFX4Q33E94 735 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 CNPY1Q3B7I2 92 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 AMIGO1Q86WK6 493 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 FBXL6Q8N531 539 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 TSACCQ96A04 125 aaPredicted RBP28.27■■■□□ 2.12
PABPN1-201ENST00000216727 DGCR14Q96DF8 476 aaKnown RBP28.27■■■□□ 2.12
PABPN1-201ENST00000216727 DPH7Q9BTV6 452 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 DOHHQ9BU89 302 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 AICDAQ9GZX7 198 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 CXorf36Q9H7Y0 433 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 C3orf18Q9UK00 162 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 U3KQV3 271 aa28.27■■■□□ 2.12
PABPN1-201ENST00000216727 SEC24DO94855 1032 aaPredicted RBP28.26■■■□□ 2.12
PABPN1-201ENST00000216727 PRIM2P49643 509 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 PCBP4P57723 403 aaKnown RBP28.26■■■□□ 2.12
PABPN1-201ENST00000216727 EEF1A2Q05639 463 aaKnown RBP28.26■■■□□ 2.12
PABPN1-201ENST00000216727 PPP1R8Q12972 351 aaKnown RBP28.26■■■□□ 2.12
PABPN1-201ENST00000216727 LRRC32Q14392 662 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 ZNF630Q2M218 657 aaPredicted RBP28.26■■■□□ 2.12
PABPN1-201ENST00000216727 CCDC80Q76M96 950 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 RD3Q7Z3Z2 195 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 FAM20CQ8IXL6 584 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 ARL10Q8N8L6 244 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 OR5AK3PQ8NH89 298 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 LCN9Q8WX39 176 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 C7orf34Q96L11 122 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 MUS81Q96NY9 551 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 TEFMQ96QE5 360 aaKnown RBP28.26■■■□□ 2.12
PABPN1-201ENST00000216727 MBOAT4Q96T53 435 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 NLNQ9BYT8 704 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 NEUROD4Q9HD90 331 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 SLAMF7Q9NQ25 335 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 FAM118AQ9NWS6 357 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 TAS2R7Q9NYW3 318 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 HS3ST3A1Q9Y663 406 aa28.26■■■□□ 2.12
PABPN1-201ENST00000216727 A0A087WXM4 84 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 TMEM229AB2RXF0 380 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 HAT1O14929 419 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 BMP10O95393 424 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 SERPIND1P05546 499 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 SOAT1P35610 550 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 ALDH9A1P49189 494 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 ARHGDIAP52565 204 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 SELENOWP63302 87 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 KCNJ10P78508 379 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 SCARB2Q14108 478 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 IQCCQ4KMZ1 466 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 ZC3H12BQ5HYM0 836 aaKnown RBP28.26■■■□□ 2.11
PABPN1-201ENST00000216727 ZNF425Q6IV72 752 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 TMEM145Q8NBT3 493 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 NRBF2Q96F24 287 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 ABCG4Q9H172 646 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 USP36Q9P275 1121 aaKnown RBP28.26■■■□□ 2.11
PABPN1-201ENST00000216727 ZNF624Q9P2J8 865 aaPredicted RBP28.26■■■□□ 2.11
PABPN1-201ENST00000216727 PLXND1Q9Y4D7 1925 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 MAP4K5Q9Y4K4 846 aa28.26■■■□□ 2.11
PABPN1-201ENST00000216727 hCG_2039718K7EN88 272 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TOR1BO14657 336 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 OR6B1O95007 311 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 DNAJA1P31689 397 aaKnown RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 SSR2P43308 183 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 PLA2G16P53816 162 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 ITGA1P56199 1179 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TMEM31Q5JXX7 168 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 BORAQ6PGQ7 559 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TMEM26Q6ZUK4 368 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TPD52L3Q96J77 140 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 TRNAU1APQ9NX07 287 aaKnown RBP28.25■■■□□ 2.11
PABPN1-201ENST00000216727 EBF1Q9UH73 591 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 KLF15Q9UIH9 416 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 SNX7Q9UNH6 387 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 PADI2Q9Y2J8 665 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 A6NCN8 305 aa28.25■■■□□ 2.11
PABPN1-201ENST00000216727 SEMA4FO95754 770 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms