RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 VLDLRP98155 873 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 BNIP2Q12982 314 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 ECH1Q13011 328 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 SATL1Q86VE3 508 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 DTD2Q96FN9 168 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 DHRS7Q9Y394 339 aa13.22□□□□□ -0.29
SIX4-201ENST00000216513 SSNA1O43805 119 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 CLPXO76031 633 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 IMPDH1P20839 514 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 DPYSQ14117 519 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 ZFP1Q6P2D0 407 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 ADGRD1Q6QNK2 874 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 ABRAXAS1Q6UWZ7 409 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 GALNT12Q8IXK2 581 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 RBM12BQ8IXT5 1001 aaKnown RBP13.21□□□□□ -0.29
SIX4-201ENST00000216513 OR56A1Q8NGH5 318 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 DERL2Q9GZP9 239 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 SRPK3Q9UPE1 567 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 PCDHGA6Q9Y5G7 932 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 DFNA5O60443 496 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 RORAP35398 523 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 ARFIP1P53367 373 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 AQP4P55087 323 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 COQ8BQ96D53 544 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 STOX2Q9P2F5 926 aaPredicted RBP13.21□□□□□ -0.29
SIX4-201ENST00000216513 PTGDR2Q9Y5Y4 395 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 A0A1W2PPL8 197 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 CPNE3O75131 537 aaKnown RBP13.21□□□□□ -0.29
SIX4-201ENST00000216513 PRSS56P0CW18 603 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 PPP2R2BQ00005 443 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 PEG10Q86TG7 708 aaKnown RBP13.21□□□□□ -0.29
SIX4-201ENST00000216513 SPEM1Q8N4L4 309 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 CNEP1R1Q8N9A8 125 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 BOLLQ8N9W6 283 aaKnown RBP13.21□□□□□ -0.29
SIX4-201ENST00000216513 THAP10Q9P2Z0 257 aaPredicted RBP13.21□□□□□ -0.29
SIX4-201ENST00000216513 MAGEL2Q9UJ55 1249 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 C3orf18Q9UK00 162 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
SIX4-201ENST00000216513 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 ABCB7O75027 752 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.3
SIX4-201ENST00000216513 MPC1LP0DKB6 136 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 STK11Q15831 433 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 NAT8LQ8N9F0 302 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 FAM122AQ96E09 287 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 CD46P15529 392 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 OR1D5P58170 312 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 ABHD18Q0P651 414 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 MCATQ8IVS2 390 aaKnown RBP13.21□□□□□ -0.3
SIX4-201ENST00000216513 IQCF2Q8IXL9 164 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 PDCD10Q9BUL8 212 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 RHCGQ9UBD6 479 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 CAMK2AQ9UQM7 478 aa13.21□□□□□ -0.3
SIX4-201ENST00000216513 S1PR4O95977 384 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 ACVR2AP27037 513 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 OMPP47874 163 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 ZC3HC1Q86WB0 502 aaKnown RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 C1orf210Q8IVY1 113 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 CBR4Q8N4T8 237 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 PROKR2Q8NFJ6 384 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 FAM192AQ9GZU8 254 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 FAM92AA1XBS5 289 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 RTCAO00442 366 aaKnown RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 PLIN3O60664 434 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 C6orf47O95873 294 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 RCBTB1Q8NDN9 531 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 OR9I1Q8NGQ6 314 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 FAM174AQ8TBP5 190 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 TMEM234Q8WY98 164 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 ZNF570Q96NI8 536 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 BHLHE41Q9C0J9 482 aaPredicted RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 DENND2DQ9H6A0 471 aaPredicted RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 MYH8P13535 1937 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 SH3D21A4FU49 640 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 A8MT66 165 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 RNF13O43567 381 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 GDF1P27539 372 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 RCVRNP35243 200 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 SLC5A9Q2M3M2 681 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 IGDCC3Q8IVU1 814 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 DTX3Q8N9I9 347 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 S100A14Q9HCY8 104 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 THSD1Q9NS62 852 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 FZD4Q9ULV1 537 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 WBP11Q9Y2W2 641 aaKnown RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 TAF4O00268 1085 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 FARS2O95363 451 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms