RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NCF1CA8MVU1 366 aaPredicted RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 SLC25A12O75746 678 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 PIAS1O75925 651 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 MLYCDO95822 493 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 SERPINA6P08185 405 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 NCF1P14598 390 aaPredicted RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 HTR1EP28566 365 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 MLF1P58340 268 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 BTN3A2P78410 334 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 TSNQ15631 228 aaKnown RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 KRTCAP3Q53RY4 240 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 BNC2Q6ZN30 1099 aaPredicted RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 CAPN12Q6ZSI9 719 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 SIAH3Q8IW03 269 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 CPSF7Q8N684 471 aaKnown RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 NFAM1Q8NET5 270 aaPredicted RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 CLK4Q9HAZ1 481 aaKnown RBP14.03□□□□□ -0.16
UPK3A-201ENST00000216211 EML6Q6ZMW3 1958 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 DCHS2Q6V1P9 2916 aa14.03□□□□□ -0.16
UPK3A-201ENST00000216211 CSMD2Q7Z408 3487 aa14.02□□□□□ -0.16
UPK3A-201ENST00000216211 E7ESA3 106 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 ASNA1O43681 348 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 NME2P1O60361 137 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 SNRPB2P08579 225 aaKnown RBP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 C1GALT1C1LP0DN25 315 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 GNAZP19086 355 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 NME2P22392 152 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 SLC6A12P48065 614 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 HNMTP50135 292 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 STXBP1P61764 594 aaKnown RBP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 HSF1Q00613 529 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 RUNX2Q13950 521 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 SLBPQ14493 270 aaKnown RBP eCLIP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 Q6ZPB1 254 aaPredicted RBP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 SLCO4C1Q6ZQN7 724 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 NCCRP1Q6ZVX7 275 aaPredicted RBP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 ADAMTSL2Q86TH1 951 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF227Q86WZ6 799 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 SPPL2CQ8IUH8 684 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 ZBED8Q8IZ13 594 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 ARMC2Q8NEN0 867 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 UBLCP1Q8WVY7 318 aaPredicted RBP14.02□□□□□ -0.17
UPK3A-201ENST00000216211 CCT6BQ92526 530 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 RHBDF1Q96CC6 855 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 VPS39Q96JC1 886 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 FAR2Q96K12 515 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 DEFB126Q9BYW3 111 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 EPB41L4BQ9H329 900 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 CAB39LQ9H9S4 337 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 GPAMQ9HCL2 828 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 SMYD2Q9NRG4 433 aa14.02□□□□□ -0.17
UPK3A-201ENST00000216211 PDZD2O15018 2839 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 FCHO1O14526 889 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 H2AFYO75367 372 aaKnown RBP14.01□□□□□ -0.17
UPK3A-201ENST00000216211 NUDT17P0C025 328 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 HNRNPH1P31943 449 aaKnown RBP14.01□□□□□ -0.17
UPK3A-201ENST00000216211 CYB561P49447 251 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 CBLBQ13191 982 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF630Q2M218 657 aaPredicted RBP14.01□□□□□ -0.17
UPK3A-201ENST00000216211 FBXO48Q5FWF7 155 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 RNFT1Q5M7Z0 435 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 TMIGD1Q6UXZ0 262 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 KLHDC8AQ8IYD2 350 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 SPATA6LQ8N4H0 392 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 APCDD1LQ8NCL9 501 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 ADAMTS18Q8TE60 1221 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 GAL3ST3Q96A11 431 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 MS4A6EQ96DS6 147 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 TMEM79Q9BSE2 394 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 MCMBPQ9BTE3 642 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 PHACTR1Q9C0D0 580 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 RHOJQ9H4E5 214 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 RUBCNLQ9H714 662 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 POPDC3Q9HBV1 291 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 PNO1Q9NRX1 252 aaKnown RBP14.01□□□□□ -0.17
UPK3A-201ENST00000216211 NSMCE4AQ9NXX6 385 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 MTO1Q9Y2Z2 717 aaKnown RBP14.01□□□□□ -0.17
UPK3A-201ENST00000216211 MEMO1Q9Y316 297 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 MMACHCQ9Y4U1 282 aa14.01□□□□□ -0.17
UPK3A-201ENST00000216211 TRBV11-1A0A0K0K1C0 115 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 CDK2AP1O14519 115 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 TAPBPO15533 448 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 ERI3O43414 337 aaKnown RBP14□□□□□ -0.17
UPK3A-201ENST00000216211 MYO1DO94832 1006 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 ABOP16442 354 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 ZNF24P17028 368 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 PPP2R1BP30154 601 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 TRHRP34981 398 aaPredicted RBP14□□□□□ -0.17
UPK3A-201ENST00000216211 HLCSP50747 726 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 CLCN2P51788 898 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 HNRNPFP52597 415 aaKnown RBP14□□□□□ -0.17
UPK3A-201ENST00000216211 SLC12A2P55011 1212 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 CBX1P83916 185 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 CDSNQ15517 529 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 TGFBIQ15582 683 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 XKRXQ6PP77 449 aa14□□□□□ -0.17
UPK3A-201ENST00000216211 GHDCQ8N2G8 530 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms