RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TGM6O95932 706 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 IFNA2P01563 188 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 ESR1P03372 595 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 EPHX1P07099 455 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 CLCNKBP51801 687 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 CRISP3P54108 245 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 DNAJB13P59910 316 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 POMZP3Q6PJE2 187 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 PIM3Q86V86 326 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TM9SF2Q99805 663 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 PCBD2Q9H0N5 130 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 GPN2Q9H9Y4 310 aaPredicted RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 PLEKHA1Q9HB21 404 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TMEM45AQ9NWC5 275 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 GFOD1Q9NXC2 390 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 INTS6Q9UL03 887 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 RIPK3Q9Y572 518 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 PCDHGB5Q9Y5G0 923 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 POLR1CO15160 346 aaPredicted RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 FFAR2O15552 330 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 SULT1B1O43704 296 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 ZNF254O75437 659 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 RBBP9O75884 186 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 OAZ2O95190 189 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 CERS1P27544 350 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 ITPKBP27987 946 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 OR4D2P58180 307 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 CDK6Q00534 326 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TLE2Q04725 743 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 LCN8Q6JVE9 175 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 DGLUCYQ7Z3D6 616 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 PAPD5Q8NDF8 572 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 RAD9AQ99638 391 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 TUBG2Q9NRH3 451 aa10.09□□□□□ -0.79
VCL-201ENST00000211998 MRPS17Q9Y2R5 130 aaKnown RBP10.09□□□□□ -0.79
VCL-201ENST00000211998 ARL5CA6NH57 179 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CD8B2A6NJW9 211 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 FAM170BA6NMN3 283 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 PROM1O43490 865 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 ALX3O95076 343 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 MT-ND5P03915 603 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 ALPPP05187 535 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 PET100P0DJ07 73 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CD8BP10966 210 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 AGXTP21549 392 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 KCNC1P48547 511 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CDK10Q15131 360 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 DPYSL2Q16555 572 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 MEDAGQ5VYS4 303 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 HACD2Q6Y1H2 254 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 SPATC1Q76KD6 591 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 SSX9Q7RTT3 188 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 OR8J3Q8NGG0 315 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 TSPEARQ8WU66 669 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 FUBP3Q96I24 572 aaKnown RBP eCLIP10.08□□□□□ -0.8
VCL-201ENST00000211998 RIPOR3Q96MK2 946 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 SYT4Q9H2B2 425 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 DUS2Q9NX74 493 aaKnown RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 MKS1Q9NXB0 559 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 FKBPLQ9UIM3 349 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 ZFP37Q9Y6Q3 630 aaPredicted RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 BORCS7-ASMTA0A0B4J1R7 106 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 UBFD1O14562 309 aaKnown RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 PRKYO43930 277 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 ALDOAP04075 364 aaKnown RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 PKLRP30613 574 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 KHKP50053 298 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CAP1Q01518 475 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 EMX2Q04743 252 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 ZNF678Q5SXM1 525 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 SLC5A11Q8WWX8 675 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 COQ8BQ96D53 544 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 TEX10Q9NXF1 929 aaPredicted RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 GTF2IRD1Q9UHL9 959 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 MGAT4BQ9UQ53 548 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 A0A0G2JMP0 313 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CLDN4O14493 209 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 MITFO75030 526 aaPredicted RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 C8GP07360 202 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CFHP08603 1231 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 IL3P08700 152 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 GKN3PP0CG01 181 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 PTGER3P43115 390 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 OR1E2P47887 323 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 DGKGP49619 791 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 TAS2R43P59537 309 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 ZNF616Q08AN1 781 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 PUM1Q14671 1186 aaKnown RBP eCLIP10.08□□□□□ -0.8
VCL-201ENST00000211998 TAC4Q86UU9 113 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 SERPINA9Q86WD7 417 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 BEST4Q8NFU0 473 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 OR4M2Q8NGB6 313 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 BRSK1Q8TDC3 778 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 PCNPQ8WW12 178 aaKnown RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 METTL21AQ8WXB1 218 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 CNOT9Q92600 299 aaKnown RBP10.08□□□□□ -0.8
VCL-201ENST00000211998 ARL5AQ9Y689 179 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 NID2Q14112 1375 aa10.08□□□□□ -0.8
VCL-201ENST00000211998 IGLV3-22A0A075B6J6 115 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms