RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GDF7Q7Z4P5 450 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 VN1R5Q7Z5H4 357 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 FGD2Q7Z6J4 655 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF595Q8IYB9 648 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 KRT78Q8N1N4 520 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 CPSF7Q8N684 471 aaKnown RBP14.81□□□□□ -0.04
ERCC1-201ENST00000013807 ZFP62Q8NB50 900 aaPredicted RBP14.81□□□□□ -0.04
ERCC1-201ENST00000013807 BBOF1Q8ND07 529 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 VMP1Q96GC9 406 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 FAR2Q96K12 515 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 CAPZA3Q96KX2 299 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 UBXN10Q96LJ8 280 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 PHF12Q96QT6 1004 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 DMRTA2Q96SC8 542 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 TSPAN10Q9H1Z9 355 aaPredicted RBP14.81□□□□□ -0.04
ERCC1-201ENST00000013807 RHBGQ9H310 441 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 SMYD2Q9NRG4 433 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 PLSCR2Q9NRY7 297 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF223Q9UK11 482 aaPredicted RBP14.81□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF490Q9ULM2 529 aaPredicted RBP14.81□□□□□ -0.04
ERCC1-201ENST00000013807 CELSR1Q9NYQ6 3014 aa14.81□□□□□ -0.04
ERCC1-201ENST00000013807 A0A088AWK7 358 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 TMEM200CA6NKL6 621 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 USP27XA6NNY8 438 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 TGFBR3LH3BV60 316 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 EIF3HO15372 352 aaKnown RBP eCLIP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PRAMEF4O60810 478 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 CLDN14O95500 239 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 C1QAP02745 245 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF10P21506 573 aaPredicted RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 CASP2P42575 452 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PAFAH1B1P43034 410 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 ATP6V0D1P61421 351 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PCDH1Q08174 1060 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 SLBPQ14493 270 aaKnown RBP eCLIP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 C18orf21Q32NC0 220 aaPredicted RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PRAMEF9Q5VWM5 478 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 SULT1C3Q6IMI6 304 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 ABHD17CQ6PCB6 329 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 FRA10AC1Q70Z53 315 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 SULF2Q8IWU5 870 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 ZBED8Q8IZ13 594 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 EID3Q8N140 333 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PDPRQ8NCN5 879 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PDLIM2Q96JY6 352 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 SERINC2Q96SA4 455 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 GPR22Q99680 433 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 NAPGQ99747 312 aaPredicted RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 TMEM79Q9BSE2 394 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 TRIM8Q9BZR9 551 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 CNOT10Q9H9A5 744 aaKnown RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 GRPEL1Q9HAV7 217 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 ADAP2Q9NPF8 381 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PRTFDC1Q9NRG1 225 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 SH3BGRL2Q9UJC5 107 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 PTBP2Q9UKA9 531 aaKnown RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 DAPP1Q9UN19 280 aa14.8□□□□□ -0.04
ERCC1-201ENST00000013807 MRPS33Q9Y291 106 aaKnown RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 MTO1Q9Y2Z2 717 aaKnown RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 YARS2Q9Y2Z4 477 aaKnown RBP14.8□□□□□ -0.04
ERCC1-201ENST00000013807 ANKDD1BA6NHY2 528 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 ERI3O43414 337 aaKnown RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 B3GALT2O43825 422 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 CTNSO60931 367 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 ITGA10O75578 1167 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 MYO1DO94832 1006 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 CD1DP15813 335 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 HNRNPFP52597 415 aaKnown RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 GNG11P61952 73 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 CDSNQ15517 529 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 ELAVL1Q15717 326 aaKnown RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 ZKSCAN8Q15776 578 aaPredicted RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 TBCCQ15814 346 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 GPALPP1Q8IXQ4 340 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 ZNF295-AS1Q8N0V1 137 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 TMEM52Q8NDY8 209 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 C7orf57Q8NEG2 295 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 AGAP11Q8TF27 550 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 KIAA1191Q96A73 305 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 MTFMTQ96DP5 389 aaKnown RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 PTCD3Q96EY7 689 aaKnown RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 TSPAN17Q96FV3 270 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 CPNE1Q99829 537 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 TREX2Q9BQ50 279 aaPredicted RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 EFCAB11Q9BUY7 163 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 TRIM31Q9BZY9 425 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 REXO4Q9GZR2 422 aaKnown RBP14.79□□□□□ -0.04
ERCC1-201ENST00000013807 PRDM7Q9NQW5 492 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 DNAJC11Q9NVH1 559 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 KCMF1Q9P0J7 381 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 WHRNQ9P202 907 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 VTI1BQ9UEU0 232 aa14.79□□□□□ -0.04
ERCC1-201ENST00000013807 HIVEP1P15822 2718 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 TRBV11-1A0A0K0K1C0 115 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
ERCC1-201ENST00000013807 PRRG2O14669 202 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 STK16O75716 305 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 ZFAND5O76080 213 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 CCDC166P0CW27 439 aa14.78□□□□□ -0.04
ERCC1-201ENST00000013807 COX6B1P14854 86 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms