RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 LAX1Q8IWV1 398 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 ADGRF3Q8IZF5 1079 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 AADATQ8N5Z0 425 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 GPR32P1Q8NGA4 272 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 DOHHQ9BU89 302 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 MVB12BQ9H7P6 319 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 C1GALT1Q9NS00 363 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 CLCA1A8K7I4 914 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 ENTPD6O75354 484 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 HBQ1P09105 142 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 NPPBP16860 134 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 CHMP24386 653 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 CTSKP43235 329 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 TBPL1P62380 186 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 ZNF697Q5TEC3 545 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 DGLUCYQ7Z3D6 616 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 FCRL1Q96LA6 429 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 CXorf36Q9H7Y0 433 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 SCN3BQ9NY72 215 aa10.23□□□□□ -0.77
USP28-201ENST00000003302 SOD1P00441 154 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ZNF750Q32MQ0 723 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 TCEAL5Q5H9L2 206 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 LRRC70Q7Z2Q7 622 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ZNF547Q8IVP9 402 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 AQP11Q8NBQ7 271 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 TP53INP1Q96A56 240 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 PSD2Q9BQI7 771 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 WDR12Q9GZL7 423 aaKnown RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 TSC22D4Q9Y3Q8 395 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 MDC1Q14676 2089 aaKnown RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 OTOL1A6NHN0 477 aaPredicted RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 H7C4K7 107 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 PLD2O14939 933 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 IGSF6O95976 241 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 RNF144AP50876 292 aaPredicted RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 HOXC5Q00444 222 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 SLAMF1Q13291 335 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 GPR33Q49SQ1 333 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 DEPDC1Q5TB30 811 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 FAM83HQ6ZRV2 1179 aaPredicted RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 C12orf40Q86WS4 652 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 OR5D16Q8NGK9 328 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 APOL4Q9BPW4 351 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 WNT6Q9Y6F9 365 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 FEZF1A0PJY2 475 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 TFECO14948 347 aaPredicted RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 SPINT1O43278 529 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ARHGEF15O94989 841 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 URODP06132 367 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 EEF1A2Q05639 463 aaKnown RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 SFSWAPQ12872 951 aaKnown RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 B3GLCTQ6Y288 498 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ARMC8Q8IUR7 673 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 KIAA1958Q8N8K9 716 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ZFP41Q8N8Y5 198 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 DTX3Q8N9I9 347 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 GPR151Q8TDV0 419 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 CAPSLQ8WWF8 208 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 GABARAPL3Q9BY60 117 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 TP63Q9H3D4 680 aaPredicted RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 SERHL2Q9H4I8 314 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 EHD1Q9H4M9 534 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 TRPM6Q9BX84 2022 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 GLOD5A6NK44 160 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 GGTA1PQ4G0N0 100 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 Q5BKY6 102 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 SLCO4C1Q6ZQN7 724 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 CHTF18Q8WVB6 975 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 PPP1R14BQ96C90 147 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ZFYVE19Q96K21 471 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 LYSMD1Q96S90 227 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 MMP28Q9H239 520 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 HHATLQ9HCP6 504 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ATAD3AQ9NVI7 634 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 ANKMY1Q9P2S6 941 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 IL20RAQ9UHF4 553 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 GPC6Q9Y625 555 aaPredicted RBP10.22□□□□□ -0.77
USP28-201ENST00000003302 CACNA1CQ13936 2221 aa10.22□□□□□ -0.77
USP28-201ENST00000003302 COL4A3Q01955 1670 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 ZW10O43264 779 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 OR56A5P0C7T3 313 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 SP3Q02447 781 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 SLBPQ14493 270 aaKnown RBP eCLIP10.21□□□□□ -0.77
USP28-201ENST00000003302 NFE2L1Q14494 772 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 ZNF79Q15937 498 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 TMC5Q6UXY8 1006 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 LAS2Q8IYD9 372 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 DOK4Q8TEW6 326 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 SPASTQ9UBP0 616 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 FRS3O43559 492 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 IL3P08700 152 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 IL1RNP18510 177 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 PRPH2P23942 346 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 SOAT1P35610 550 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 C10orf62Q5T681 223 aaPredicted RBP10.21□□□□□ -0.77
USP28-201ENST00000003302 CFAP206Q8IYR0 622 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 FIBINQ8TAL6 211 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 KLK6Q92876 244 aa10.21□□□□□ -0.77
USP28-201ENST00000003302 ZG16BQ96DA0 208 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms