RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 ThpoP40226 356 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 SmoP56726 793 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Atp5a1Q03265 553 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Znf367Q0VDT2 340 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Dusp11Q6NXK5 321 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Flrt2Q8BLU0 660 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Scara5Q8K299 491 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gpn2Q8VEJ1 310 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Pno1Q9CPS7 248 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Mrps17Q9CQE3 120 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Spata19Q9DAQ9 154 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Tsc22d4Q9EQN3 387 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Olfr549E9Q542 316 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Olfr519K7N645 319 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 TktP40142 623 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 SbplQ3TUY3 232 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Lrrc15Q80X72 579 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Prap1Q80XD8 149 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Znf786Q8BV42 777 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Il36gQ8R460 164 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Rnh1Q91VI7 456 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gpr45Q9EQQ4 373 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 H2afb1S4R1E0 115 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 H2afb3S4R1G7 115 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Auts2A0A087WPF7 1261 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Wdr95D3Z7A8 784 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Nthl1O35980 300 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gstm1P10649 218 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Atp1b2P14231 290 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 TesP47226 423 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 St3gal1P54751 337 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Alox12eP55249 662 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Cln6Q3U466 308 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Hephl1Q3V1H3 1159 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 PdprQ7TSQ8 878 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Ston2Q8BZ60 895 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Rnf208Q8K0W3 265 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Padi6Q8K3V4 682 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gsg1Q8R1W2 324 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Fam96bQ9D187 163 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Slc34a2Q9DBP0 697 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Obox5G3X9P6 291 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 TazI7HJS2 263 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 C9P06683 548 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 ThP24529 498 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Rps13P62301 151 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Eml4Q3UMY5 988 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 StradaQ3UUJ4 431 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Znf354aQ61751 572 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 DpcdQ8BPA8 203 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 C1raQ8CG16 707 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Trim61Q8JZK6 461 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Rnf121Q8R1Z9 327 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Mrps23Q8VE22 177 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Fads1Q920L1 447 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Stoml2Q99JB2 353 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 ProzQ9CQW3 399 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 GrifinQ9D1U0 144 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Ift22Q9DAI2 185 aa13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 TsnaxQ9QZE7 290 aaKnown RBP13.53□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Znf518bB2RRE4 1077 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Vmn2r101E9PZS9 857 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 H2-T24F8VQG4 363 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gstm3P19639 218 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Spag8Q3V0Q6 470 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Timm8a2Q4FZG7 97 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gdi2Q61598 445 aaKnown RBP13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Itln1bQ80ZA0 313 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Wdr37Q8CBE3 496 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Slc51aQ8R000 340 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Cdhr1Q8VHP6 859 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Kif13aQ9EQW7 1749 aa13.52□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gm14085A2AWR5 660 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Slc44a5Q5RJI2 710 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Slc35f1Q8BGK5 408 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ppp1r1cQ8BKK4 108 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 FgbQ8K0E8 481 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Unc5aQ8K1S4 898 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 F11Q91Y47 624 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Lhfpl3Q9CTN8 222 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 HhatlQ9D1G3 503 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 P33monoxQ9DBN4 303 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Dap3Q9ER88 391 aaKnown RBP13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Hipk2Q9QZR5 1196 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Olfr566A0A1B0GST0 319 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Zfp992B1ASD8 573 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 DdcO88533 480 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Ido1P28776 407 aaKnown RBP13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 EpycP70186 322 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 LchnQ3UHG7 455 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 GkQ64516 559 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nudt15Q8BG93 170 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Smoc2Q8CD91 447 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 FbrsQ8R089 466 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Zfp991Q8R1N3 573 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Olfr686Q8VGX3 317 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Rnf167Q91XF4 347 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Nrif1Q923B3 828 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Upk3bl1Q9D701 249 aa13.52□□□□□ -0.25
Col3a1-201ENSMUST00000087883 Clca3a2Q9EQR4 902 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms