RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Il1rapQ61730 570 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tnpo3Q6P2B1 923 aaKnown RBP11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Olfr871Q7TRF0 311 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ticam1Q80UF7 732 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Lrrc8dQ8BGR2 859 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Arl15Q8BGR6 204 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Gabra5Q8BHJ7 463 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Muc20Q8BUE7 656 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Acp7Q8BX37 438 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pih1h3bQ8C6P5 218 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Olfr763Q8VGC1 309 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 GpnmbQ99P91 574 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Dhrs7Q9CXR1 338 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ndufs4Q9CXZ1 175 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Insm2Q9JMC2 493 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 PpieQ9QZH3 301 aaKnown RBP11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Lrit3W8DXL4 681 aa11.47□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Phf11bB4XVQ1 276 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Akr1b10G5E895 316 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Hnrnph1O35737 449 aaKnown RBP11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 F2rl3O88634 396 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Zfp36P22893 319 aaKnown RBP11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Casp2P29594 452 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Id2P41136 134 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Epb42P49222 691 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Hnf4aP49698 474 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rps17P63276 135 aaKnown RBP11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Mtf1Q07243 675 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Dnajb14Q149L6 379 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Khdc4Q3TCX3 612 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Rabl6Q5U3K5 725 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Zzz3Q6KAQ7 910 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pif1Q80SX8 650 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pknox2Q8BG99 474 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Slc25a40Q8BGP6 337 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pcdh20Q8BIZ0 952 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Itih5Q8BJD1 952 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Psd4Q8BLR5 1005 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 CntrobQ8CB62 887 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Fbxw17Q8CFE8 466 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Gramd1cQ8CI52 457 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Vps50Q8CI71 964 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Il17rdQ8JZL1 738 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Otud6bQ8K2H2 294 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ddx52Q8K301 598 aaKnown RBP11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 DolkQ8R2Y3 534 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tmem45bQ8VCZ2 278 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Cavin3Q91VJ2 260 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Ubl7Q91W67 380 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Gjc3Q921C1 269 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Pbld2Q9CXN7 288 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Tnfaip8l2Q9D8Y7 184 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Mfsd1Q9DC37 464 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 AnkhQ9JHZ2 492 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Cpn1Q9JJN5 457 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Skp1Q9WTX5 163 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 NfkbiaQ9Z1E3 314 aa11.46□□□□□ -0.57
Ccdc28a-202ENSMUST00000080860 Nbeal1E9PYP2 2688 aa11.46□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Gm42517A0A1Y7VLQ2 374 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Cytl1A1E5L0 139 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Prrt4B2RU40 902 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Gm8444F6XS56 118 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 NumblO08919 604 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Surf2P09926 257 aaKnown RBP11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 ChgbP16014 677 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Hsd3b1P24815 373 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Ube2e3P52483 207 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 OstnP61364 130 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Meaf6Q2VPQ9 191 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Acsbg2Q2XU92 667 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Dhrs11Q3U0B3 260 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Arid5aQ3U108 590 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Ankrd34bQ3UUF8 508 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Tbc1d24Q3UUG6 561 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Slc39a12Q5FWH7 689 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Cdkn2cQ60772 168 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 PigaQ64323 485 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Ptx4Q6RUU0 478 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Paqr3Q6TCG8 311 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Spag7Q7TNE3 227 aaKnown RBP11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 NagpaQ8BJ48 517 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Coro2aQ8C0P5 524 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Tbl3Q8C4J7 801 aaKnown RBP11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Sidt2Q8CIF6 832 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Il17rcQ8K4C2 698 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Tm6sf2Q8R1J1 378 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Olfr700Q8VFM5 316 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 PxnQ8VI36 591 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 BsndQ8VIM4 307 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Lgals12Q91VD1 314 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Mgat2Q921V5 442 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Slc5a2Q923I7 670 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Rgs10Q9CQE5 181 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Cby3Q9CVN6 235 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Tmem35aQ9D328 167 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Ankrd22Q9D3J5 191 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Nxnl2Q9D531 156 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Tacc3Q9JJ11 631 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Prg4Q9JM99 1054 aa11.45□□□□□ -0.58
Ccdc28a-202ENSMUST00000080860 Prl3c1Q9QUN5 212 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms