RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr952Q8VFD7 314 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr380Q8VGT3 311 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc8b1Q925Q3 585 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Msh4Q99MT2 958 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Otud1Q9CUB6 454 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mdm1Q9D067 708 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cyc1Q9D0M3 325 aaKnown RBP8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 HhatlQ9D1G3 503 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr955Q9EQ97 314 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem8aQ9ESN3 769 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gsk3bQ9WV60 420 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Clec2iQ9WVF9 217 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ly6g6dQ9Z1Q3 135 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem74bA2AU34 232 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm28043E0CXC2 719 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zscan4bE9Q3G0 505 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hmgxb3G3X9M3 1254 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 NagluO88325 739 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cd93O89103 644 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 En1P09065 401 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 PthlhP22858 175 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 AcadlP51174 430 aaKnown RBP8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Entpd1P55772 510 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hpcal1P62748 193 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 EvlP70429 414 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ankdd1bQ14DN9 521 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Foxred1Q3TQB2 487 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rars2Q3U186 578 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc22a23Q3UHH2 689 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 B3gnt3Q5JCS9 372 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Satb1Q60611 764 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cr1lQ64735 483 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Doc2aQ7TNF0 405 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 C2cd4bQ80XU5 340 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rmnd5aQ80YQ8 391 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gprin3Q8BWS5 763 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc44a2Q8BY89 706 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Prmt5Q8CIG8 637 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gtf2a1lQ8R4I4 468 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Akr1c21Q91WR5 323 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pcdhb20Q91XZ9 799 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ptdss1Q99LH2 473 aaKnown RBP8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mtfr1Q99MB2 328 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Wdr45bQ9CR39 344 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ap2b1Q9DBG3 937 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Emc7Q9EP72 241 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sh2d3cQ9QZS8 854 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Uba2Q9Z1F9 638 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem196V9GX04 182 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 L3mbtl1A2A5N8 826 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr1095A3KPP7 308 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mgl2A9XX86 381 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm20390E9PZF0 267 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Spaca6E9Q8Q8 339 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Alox8O35936 677 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gabra3P26049 492 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rab23P35288 237 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gpx3P46412 226 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Alox5P48999 674 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tango2P54797 276 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Serpina7P61939 418 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Galnt3P70419 633 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Nme2Q01768 152 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cdv3Q4VAA2 281 aaKnown RBP8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Taar7dQ5QD10 358 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pdcd4Q61823 469 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Nsg1Q62092 185 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fgl1Q71KU9 314 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rfx4Q7TNK1 735 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Znf592Q8BHZ4 1262 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 B4gat1Q8BWP8 415 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Map2k7Q8CE90 535 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dnajc27Q8CFP6 273 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mterf1aQ8CHZ9 379 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr801Q8VEU1 318 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr441Q8VFS5 310 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr351Q8VGK1 310 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Acsl6Q91WC3 697 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fig4Q91WF7 907 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dtnbp1Q91WZ8 352 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Golm1Q91XA2 393 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ak5Q920P5 562 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ferd3lQ923Z4 168 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Katnal2Q9D3R6 539 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Xylt2Q9EPL0 865 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Adat1Q9JHI2 499 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fgf21Q9JJN1 210 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Thbs4Q9Z1T2 963 aa8.31□□□□□ -1.08
Trim39-201ENSMUST00000042717 Igkv15-103A0A140T8P3 115 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Map7d3A2AEY4 876 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr1306A2BFL7 312 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 EmdO08579 259 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 P2ry2P35383 373 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ppm1bP36993 390 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Csf3rP40223 837 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Stard6P59096 233 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 HnrnpkP61979 463 aaKnown RBP8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 SctQ08535 133 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cyb5d1Q5NCY3 228 aa8.3□□□□□ -1.08
Trim39-201ENSMUST00000042717 Xrcc1Q60596 631 aa8.3□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms