RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Tinf2Q9QXG9 341 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 2610008E11RikG3X964 669 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Arfip1G5E8V9 373 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Mapkapk2P49138 386 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ccdc61Q3UJV1 511 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ppp3r2Q63811 179 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Zrsr1Q64707 428 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 BspryQ80YW5 473 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Bnc2Q8BMQ3 1127 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Zc2hc1cQ8CCG1 527 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Zbtb6Q8K088 423 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Rnf121Q8R1Z9 327 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Olfr818Q8VG46 318 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Plpp3Q99JY8 312 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Klhdc8bQ9D2D9 354 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 LhppQ9D7I5 270 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Uqcrc2Q9DB77 453 aaKnown RBP17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Smg9Q9DB90 520 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ca5bQ9QZA0 317 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Stau1Q9Z108 487 aaKnown RBP17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 H60cB1B213 197 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Itga10E9Q6R1 1167 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Etv2P41163 335 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 CntfP51642 198 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Polr1cP52432 346 aaKnown RBP17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Itln1bQ80ZA0 313 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Cdt1Q8R4E9 557 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gipc3Q8R5M0 297 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Olfr677Q8VF06 312 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Chmp1b1Q99LU0 199 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Tlr1Q9EPQ1 795 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Prg3Q9JL95 222 aa17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ptges3Q9R0Q7 160 aaKnown RBP17.98■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Spin2-ps6A0A140T8V2 174 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 5830411N06RikB3F5L4 1112 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 4930444G20RikD3Z741 495 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Cyp2b23E9Q593 491 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Mpzl2O70255 215 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Hoxc5P32043 222 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Mmp11Q02853 492 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ddx5Q61656 614 aaKnown RBP17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Tas2r3Q7TQA7 316 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 AntxrlQ8BVM2 641 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Q8C4P0 716 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gatad2aQ8CHY6 629 aaKnown RBP17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Cdc123Q8CII2 336 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Olfr1263Q8VG63 306 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Man2c1Q91W89 1039 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Tcf19Q99KJ5 263 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 2410137M14RikQ9CWF0 162 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Slco6d1Q9D5W6 683 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 C1qtnf3Q9ES30 246 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Abcb10Q9JI39 715 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Kcnk7Q9Z2T1 307 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm7929A0A286YDV3 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm10718D3Z1I7 227 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8180E9PXN0 145 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm21977F6U3N7 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8247F6VRJ8 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8005F6YKY3 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm3015F6ZAP6 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8212F6ZMY5 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm7954F7BAX1 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8138F7BY56 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8232F7CFJ3 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm17079F7D8Y4 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Cyp2c68K7N6C2 491 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8165L7N218 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm8122L7N2C7 213 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm17078M0QW51 211 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Smpd1Q04519 627 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Cpxcr1Q3V0P1 322 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 BC030870Q3V2G4 71 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 CrhbpQ60571 322 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Cd300aQ6SJQ0 318 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Mpp7Q8BVD5 576 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Olfr586Q8VH13 317 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Sdcbp2Q99JZ0 292 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Agpat5Q9D1E8 365 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Rpl34Q9D1R9 117 aaKnown RBP17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Lpar3Q9EQ31 354 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 CN725425A0A087WRU1 652 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Tmem44E9Q4M0 433 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 PtnP63089 168 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 PrlrQ08501 608 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Elavl4Q61701 385 aaKnown RBP17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 SgtaQ8BJU0 315 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ces2aQ8QZR3 558 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Vmn1r18Q8R2C8 299 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Ppp1r14cQ8R4S0 164 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 PxnQ8VI36 591 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Aloxe3Q9WV07 711 aa17.97■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Gm4775F7ANJ3 135 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Vmn1r31L7N2F1 303 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Htr3aP23979 487 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Zmiz1Q6P1E1 1072 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Mapre3Q6PER3 281 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Il20raQ6PHB0 546 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Olfr1019Q8VGS3 310 aa17.96■□□□□ 0.47
Ubp1-201ENSMUST00000009885 Scgb2b17S4R2V3 82 aa17.96■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms