RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SLC22A7Q9Y694 548 aa18.85■□□□□ 0.61
PHGDH-210ENST00000641115 A0A0A6YYD5 115 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 RFPL3O75679 317 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 ATP5HO75947 161 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 LRATO95237 230 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 ATP5A1P25705 553 aaKnown RBP18.84■□□□□ 0.61
PHGDH-210ENST00000641115 HPCAL1P37235 193 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 MTTPP55157 894 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 TRA2AQ13595 282 aaKnown RBP eCLIP18.84■□□□□ 0.61
PHGDH-210ENST00000641115 RCAN2Q14206 197 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 GRM7Q14831 915 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 SLC9A5Q14940 896 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 DEFB134Q4QY38 66 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 BLOC1S3Q6QNY0 202 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 IKBIPQ70UQ0 350 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 ACOT4Q8N9L9 421 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 TTC29Q8NA56 475 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-210ENST00000641115 C16orf78Q8WTQ4 265 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 CLMPQ9H6B4 373 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 MUC6Q6W4X9 2439 aa18.84■□□□□ 0.61
PHGDH-210ENST00000641115 C9JVG2 144 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 HNRNPCL1O60812 293 aaKnown RBP18.83■□□□□ 0.61
PHGDH-210ENST00000641115 OR2B3O76000 313 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 SCELO95171 688 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 UNC5CO95185 931 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 CTSBP07858 339 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 SMIM10L1P0DMW3 83 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 FOLR1P15328 257 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 CERS1P27544 350 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 IL12AP29459 219 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 MNAT1P51948 309 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 TAS2R50P59544 299 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 TRA2BP62995 288 aaKnown RBP18.83■□□□□ 0.61
PHGDH-210ENST00000641115 SKP1P63208 163 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 E2F1Q01094 437 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 ACY1Q03154 408 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 STX5Q13190 355 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 CCDC157Q569K6 752 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 GPR135Q8IZ08 494 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 KRTCAP2Q8N6L1 136 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 TSPEARQ8WU66 669 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 GFM2Q969S9 779 aaKnown RBP18.83■□□□□ 0.61
PHGDH-210ENST00000641115 SPDL1Q96EA4 605 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 SMIM10Q96HG1 83 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 TMEM74Q96NL1 305 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 SERINC2Q96SA4 455 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 FGF21Q9NSA1 209 aa18.83■□□□□ 0.61
PHGDH-210ENST00000641115 WBP11Q9Y2W2 641 aaKnown RBP18.83■□□□□ 0.61
PHGDH-210ENST00000641115 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 DYTNA2CJ06 578 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 HYKKA2RU49 373 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 CCDC154A6NI56 674 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 AKAP10O43572 662 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 TMPRSS11DO60235 418 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 GUCY1B2O75343 617 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 FAM58BPP0C7Q3 252 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 T-ENOLP0DO92 83 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 CD1EP15812 388 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 RPL3P39023 403 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 CPA2P48052 419 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 C21orf58P58505 322 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 SLAMF1Q13291 335 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 DPY19L1Q2PZI1 675 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 MMEL1Q495T6 779 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 GARNL3Q5VVW2 1013 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 NIPAL1Q6NVV3 410 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 RBM44Q6ZP01 1051 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 RIPOR1Q6ZS17 1223 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 TESCQ96BS2 214 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 ANKHQ9HCJ1 492 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 LYARQ9NX58 379 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 SERTAD3Q9UJW9 196 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 MRPS2Q9Y399 296 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 SCN3AQ9NY46 2000 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 FITM1A5D6W6 292 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 BBIP1A8MTZ0 92 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 ANGPT2O15123 496 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 SCAMP2O15127 329 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 B3GALT2O43825 422 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 B3GALT4O96024 378 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 IL6P05231 212 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 IL3P08700 152 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 COX7A2P14406 83 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 IL1RNP18510 177 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 ZFP36L2P47974 494 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 EMP3P54852 163 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 ITGA1P56199 1179 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 ZFP36L1Q07352 338 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 C2orf80Q0P641 193 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 HEPACAMQ14CZ8 416 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 FAM174BQ3ZCQ3 159 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 LACTB2Q53H82 288 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 PIP4P1Q86T03 277 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 RIMKLAQ8IXN7 391 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 AMER3Q8N944 861 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 PRPF18Q99633 342 aaKnown RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 SPRTNQ9H040 489 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-210ENST00000641115 ENAMQ9NRM1 1142 aa18.82■□□□□ 0.6
PHGDH-210ENST00000641115 PCDHGA1Q9Y5H4 931 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms