RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PLEKHS1Q5SXH7 462 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 KLHL17Q6TDP4 642 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF517Q6ZMY9 492 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-204ENST00000638725 CAMKMTQ7Z624 323 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 AQP11Q8NBQ7 271 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 ST13P5Q8NFI4 369 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-204ENST00000638725 OR2AP1Q8NGE2 309 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 OR5AK3PQ8NH89 298 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 ASB15Q8WXK1 588 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 TMCO6Q96DC7 493 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 SCRN2Q96FV2 425 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 ST6GAL2Q96JF0 529 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 MAGEB10Q96LZ2 347 aaPredicted RBP10.47□□□□□ -0.73
SNIP1-204ENST00000638725 SAMD11Q96NU1 681 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 VPS35Q96QK1 796 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 OR4K3Q96R72 315 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 IL4I1Q96RQ9 567 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 HHATLQ9HCP6 504 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 THSD1Q9NS62 852 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 TAS2R9Q9NYW1 312 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 FTSJ1Q9UET6 329 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 TRAPPC4Q9Y296 219 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 HCN4Q9Y3Q4 1203 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 AP1M2Q9Y6Q5 423 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 V9GYH0 126 aa10.47□□□□□ -0.73
SNIP1-204ENST00000638725 TMEM202A6NGA9 273 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 SLC16A5O15375 505 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 GREM1O60565 184 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 UGDHO60701 494 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 GADD45GO95257 159 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CD72P21854 359 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CBLP22681 906 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CHMP24386 653 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CTSOP43234 321 aaPredicted RBP10.46□□□□□ -0.73
SNIP1-204ENST00000638725 XCR1P46094 333 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 PRIM2P49643 509 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 PTPN5P54829 565 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CRHR2Q13324 411 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 ZFP69Q49AA0 526 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 PLAG1Q6DJT9 500 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 GRHL2Q6ISB3 625 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 NLRP8Q86W28 1048 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 LAX1Q8IWV1 398 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 FAM217AQ8IXS0 508 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 ARL14EPQ8N8R7 260 aaPredicted RBP10.46□□□□□ -0.73
SNIP1-204ENST00000638725 HUS1BQ8NHY5 278 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CHTF18Q8WVB6 975 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 TRMT61AQ96FX7 289 aaKnown RBP10.46□□□□□ -0.73
SNIP1-204ENST00000638725 PIP5K1AQ99755 562 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 C11orf16Q9NQ32 467 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 DYRK4Q9NR20 520 aa10.46□□□□□ -0.73
SNIP1-204ENST00000638725 CNOT2Q9NZN8 540 aaKnown RBP10.46□□□□□ -0.73
SNIP1-204ENST00000638725 ANAPC1Q9H1A4 1944 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ZAR1LA6NP61 321 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 H0YIV9 168 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 RNASET2O00584 256 aaKnown RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 GASTP01350 101 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ZNF8P17098 575 aaPredicted RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ITGA2P17301 1181 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 TIA1P31483 386 aaKnown RBP eCLIP10.46□□□□□ -0.745e-6■□□□□ 8.7
SNIP1-204ENST00000638725 CD70P32970 193 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 FEN1P39748 380 aaKnown RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 LIMS1P48059 325 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 CSNK1DP48730 415 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ZNF157P51786 506 aaPredicted RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 CRISP1P54107 249 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 RPS13P62277 151 aaKnown RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 MC1RQ01726 317 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 TAB1Q15750 504 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ZNF79Q15937 498 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 LEXMQ3ZCV2 418 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ARMC4Q5T2S8 1044 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 USP45Q70EL2 814 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 OTOP2Q7RTS6 562 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 IFNL1Q8IU54 200 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 ASCC1Q8N9N2 400 aaKnown RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 FLCNQ8NFG4 579 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 DBF4BQ8NFT6 615 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 OR7G3Q8NG95 312 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 OR52N2Q8NGI0 321 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 CIDECQ96AQ7 238 aaPredicted RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 SNX18Q96RF0 628 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 MAPKAP1Q9BPZ7 522 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 NMNAT1Q9HAN9 279 aaPredicted RBP10.46□□□□□ -0.74
SNIP1-204ENST00000638725 SNTG1Q9NSN8 517 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 CLN6Q9NWW5 311 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 CLEC2DQ9UHP7 191 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 GRIP1Q9Y3R0 1128 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 MAP4K5Q9Y4K4 846 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 YIPF1Q9Y548 306 aa10.46□□□□□ -0.74
SNIP1-204ENST00000638725 OR2AG2A6NM03 316 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 TBKBP1A7MCY6 615 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 WWP2O00308 870 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 TFECO14948 347 aaPredicted RBP10.45□□□□□ -0.74
SNIP1-204ENST00000638725 ENTPD6O75354 484 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 BDKRB1P46663 353 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 ZNF33BQ06732 778 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 SLAMF1Q13291 335 aa10.45□□□□□ -0.74
SNIP1-204ENST00000638725 CST9Q5W186 159 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms