RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 RRADP55042 308 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 IFFO1Q0D2I5 559 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ZRSR2Q15696 482 aaKnown RBP20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ZNF678Q5SXM1 525 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TMEM205Q6UW68 189 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ZNF793Q6ZN11 406 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 PARP9Q8IXQ6 854 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 OR4F6Q8NGB9 312 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 WDR20Q8TBZ3 569 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ATP6V1E2Q96A05 226 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 FER1L6-AS2Q96M78 137 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 SORBS1Q9BX66 1292 aaKnown RBP20.53■□□□□ 0.88
SCN1B-206ENST00000638536 MLXIPLQ9NP71 852 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 MAGEB17A8MXT2 336 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 H0YIV9 168 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 UGDHO60701 494 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 CLDN9O95484 217 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ETHE1O95571 254 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 FHP07954 510 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ACPPP15309 386 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TAC1P20366 129 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ATP5F1P24539 256 aaPredicted RBP20.53■□□□□ 0.88
SCN1B-206ENST00000638536 CERS1P27544 350 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 HERVK_113P63132 956 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 BTG2P78543 158 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 RHAGQ02094 409 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TUBB8Q3ZCM7 444 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TRABD2AQ86V40 505 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TRPC4APQ8TEL6 797 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TSLPQ969D9 159 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 UBE2E3Q969T4 207 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 TBC1D20Q96BZ9 403 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 MTFMTQ96DP5 389 aaKnown RBP20.53■□□□□ 0.88
SCN1B-206ENST00000638536 SLC25A23Q9BV35 468 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ERVK-6Q9BXR3 956 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 ZNF160Q9HCG1 818 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 DMRT3Q9NQL9 472 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 LGALS13Q9UHV8 139 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 PLIN3O60664 434 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 B4GALT2O60909 372 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 CREB1P16220 341 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 ARL1P40616 181 aaPredicted RBP20.52■□□□□ 0.88
SCN1B-206ENST00000638536 PRKAA2P54646 552 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 RPS13P62277 151 aaKnown RBP20.52■□□□□ 0.88
SCN1B-206ENST00000638536 CLCQ05315 142 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 TCTN3Q6NUS6 607 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 LETMD1Q6P1Q0 360 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 TRIM40Q6P9F5 258 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 GALNT16Q8N428 558 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 CLEC1AQ8NC01 280 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 FAR2Q96K12 515 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 ROPN1BQ9BZX4 212 aaPredicted RBP20.52■□□□□ 0.88
SCN1B-206ENST00000638536 ROPN1Q9HAT0 212 aaPredicted RBP20.52■□□□□ 0.88
SCN1B-206ENST00000638536 ATP13A2Q9NQ11 1180 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 PCDHGA11Q9Y5H2 935 aa20.52■□□□□ 0.88
SCN1B-206ENST00000638536 LOC102723996A0A087X1L8 192 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 IGHV1-45A0A0A0MS14 117 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 COPEO14579 308 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 SUPT7LO94864 414 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 CELA2AP08217 269 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 C8orf89P0DMQ9 161 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 SFTPCP11686 197 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 IMPDH1P20839 514 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 HNRNPFP52597 415 aaKnown RBP20.51■□□□□ 0.87
SCN1B-206ENST00000638536 PCOLCEQ15113 449 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 DEPDC1Q5TB30 811 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 MILR1Q7Z6M3 343 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 RIBC1Q8N443 379 aaPredicted RBP20.51■□□□□ 0.87
SCN1B-206ENST00000638536 TMEM52Q8NDY8 209 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 OR1F2PQ96R84 312 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 PRM3Q9NNZ6 103 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 GRID1Q9ULK0 1009 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 TSC22D4Q9Y3Q8 395 aa20.51■□□□□ 0.87
SCN1B-206ENST00000638536 PCDHGA9Q9Y5G4 932 aaKnown RBP20.51■□□□□ 0.87
SCN1B-206ENST00000638536 PIK3CBP42338 1070 aa20.5■□□□□ 0.87
SCN1B-206ENST00000638536 CCT5P48643 541 aa20.5■□□□□ 0.87
SCN1B-206ENST00000638536 ZNF844Q08AG5 666 aa20.5■□□□□ 0.87
SCN1B-206ENST00000638536 LACTB2Q53H82 288 aaPredicted RBP20.5■□□□□ 0.87
SCN1B-206ENST00000638536 KHDRBS2Q5VWX1 349 aaKnown RBP20.5■□□□□ 0.87
SCN1B-206ENST00000638536 NIPAL1Q6NVV3 410 aa20.5■□□□□ 0.87
SCN1B-206ENST00000638536 CMTM7Q96FZ5 175 aa20.5■□□□□ 0.87
SCN1B-206ENST00000638536 CSF3RQ99062 836 aa20.5■□□□□ 0.87
SCN1B-206ENST00000638536 ZNF552Q9H707 407 aaPredicted RBP20.5■□□□□ 0.87
SCN1B-206ENST00000638536 ZBTB20Q9HC78 741 aaPredicted RBP20.5■□□□□ 0.87
SCN1B-206ENST00000638536 FARSBQ9NSD9 589 aaKnown RBP20.5■□□□□ 0.87
SCN1B-206ENST00000638536 A0A1W2PQ72 361 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 OR4F21O95013 312 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 SOX8P57073 446 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 SKP1P63208 163 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 AIMP2Q13155 320 aaKnown RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ABRAXAS2Q15018 415 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ZYG11AQ6WRX3 759 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ASB18Q6ZVZ8 466 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 NDUFAF7Q7L592 441 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 ANKRD37Q7Z713 158 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 SRRM1Q8IYB3 904 aaKnown RBP20.49■□□□□ 0.87
SCN1B-206ENST00000638536 CNPY4Q8N129 248 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 BANPQ8N9N5 519 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 PLPP5Q8NEB5 264 aa20.49■□□□□ 0.87
SCN1B-206ENST00000638536 L3HYPDHQ96EM0 354 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms