RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 COL26A1Q96A83 441 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 RGMAQ96B86 450 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 FAR2Q96K12 515 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 KCNC2Q96PR1 638 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 CENPKQ9BS16 269 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 TBCDQ9BTW9 1192 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 MRPL1Q9BYD6 325 aaKnown RBP18.39■□□□□ 0.53
HLA-A-209ENST00000638375 SLCO1B3Q9NPD5 702 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 HCN3Q9P1Z3 774 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 CCL27Q9Y4X3 112 aa18.39■□□□□ 0.53
HLA-A-209ENST00000638375 TERTO14746 1132 aaKnown RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 CNOT3O75175 753 aaKnown RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 SKAP2O75563 359 aaPredicted RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 SCELO95171 688 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 CHEK2O96017 543 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 JUNP05412 331 aaKnown RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 LINC00032P0C843 101 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 ATP5A1P25705 553 aaKnown RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 ARFIP1P53367 373 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 CLN3Q13286 438 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 OR4C11Q6IEV9 310 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 RGS9BPQ6ZS82 235 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 Q6ZSR9 355 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 METTL4Q8N3J2 472 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 OR2T11Q8NH01 316 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 NAF1Q96HR8 494 aaKnown RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 IFT80Q9P2H3 777 aaPredicted RBP18.38■□□□□ 0.53
HLA-A-209ENST00000638375 VPS29Q9UBQ0 182 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 CTSFQ9UBX1 484 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 CROTQ9UKG9 612 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 SEC16AO15027 2179 aa18.38■□□□□ 0.53
HLA-A-209ENST00000638375 EEDO75530 441 aaKnown RBP18.37■□□□□ 0.53
HLA-A-209ENST00000638375 HIST1H1TP22492 207 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-209ENST00000638375 SSR2P43308 183 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 MTTPP55157 894 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 SKP1P63208 163 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 GUCY1A3Q02108 690 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 RUNX2Q13950 521 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 AP5B1Q2VPB7 878 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 XKR7Q5GH72 579 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 NIPAL1Q6NVV3 410 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 MRPL14Q6P1L8 145 aaKnown RBP18.37■□□□□ 0.53
HLA-A-209ENST00000638375 DDIASQ8IXT1 998 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 IL22RA1Q8N6P7 574 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 ACOT4Q8N9L9 421 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 ZNF248Q8NDW4 579 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 APIPQ96GX9 242 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 C7orf26Q96N11 449 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 SERINC2Q96SA4 455 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 COPS7BQ9H9Q2 264 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-209ENST00000638375 MARCOQ9UEW3 520 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-209ENST00000638375 MAP4K5Q9Y4K4 846 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 CEP295Q9C0D2 2601 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 SCN3AQ9NY46 2000 aa18.37■□□□□ 0.53
HLA-A-209ENST00000638375 A0A088AWK7 358 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 SLC28A1O00337 649 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 CHST10O43529 356 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 RSL1D1O76021 490 aaKnown RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 PIM1P11309 404 aaPredicted RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 TCN2P20062 427 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 ZNF10P21506 573 aaPredicted RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 F8A1P23610 371 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 TSFMP43897 325 aaKnown RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 FOXL2P58012 376 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 BTKQ06187 659 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 NCF4Q15080 339 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 PDCD2Q16342 344 aaPredicted RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 IMPG1Q17R60 797 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 MLIPQ5VWP3 458 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 FAM47EQ6ZV65 393 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 OVCH1Q7RTY7 1134 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 COMMD6Q7Z4G1 85 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 NUDT13Q86X67 352 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 TMEM151BQ8IW70 566 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 HOMEZQ8IX15 550 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 KIRREL3Q8IZU9 778 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 CA13Q8N1Q1 262 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 C1orf52Q8N6N3 182 aaKnown RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 CHTF18Q8WVB6 975 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 KCNE4Q8WWG9 221 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 FKBP10Q96AY3 582 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 C3orf30Q96M34 536 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 ROGDIQ9GZN7 287 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 DDX31Q9H8H2 851 aaKnown RBP18.36■□□□□ 0.53
HLA-A-209ENST00000638375 NMRK1Q9NWW6 199 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 FAM53CQ9NYF3 392 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 TRPC4Q9UBN4 977 aa18.36■□□□□ 0.53
HLA-A-209ENST00000638375 IGLV3-12A0A075B6K2 115 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 A0A0A6YYD5 115 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 C9J4A7 227 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 NPIPB8E9PQR5 432 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 B3GALT2O43825 422 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 KITP10721 976 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 PRPH2P23942 346 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 TPP2P29144 1249 aaPredicted RBP18.35■□□□□ 0.53
HLA-A-209ENST00000638375 DLSTP36957 453 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 MDH1P40925 334 aaKnown RBP18.35■□□□□ 0.53
HLA-A-209ENST00000638375 SRSF6Q13247 344 aaKnown RBP18.35■□□□□ 0.53
HLA-A-209ENST00000638375 DNASE1L3Q13609 305 aa18.35■□□□□ 0.53
HLA-A-209ENST00000638375 VWA2Q5GFL6 755 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms