RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 FAM227AF5H4B4 570 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 SEMA7AO75326 666 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 CLEC3AO75596 197 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 C2P06681 752 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 CD22P20273 847 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 MAOAP21397 527 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 ZNF10P21506 573 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 HPDP32754 393 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 PLA2G16P53816 162 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 BTG2P78543 158 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 CHIT1Q13231 466 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 LAPTM5Q13571 262 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 FAM83EQ2M2I3 478 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 PAGE2BQ5JRK9 111 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 ADNP2Q6IQ32 1131 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 RPUSD3Q6P087 351 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 QSOX2Q6ZRP7 698 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 VN1R5Q7Z5H4 357 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 CCDC91Q7Z6B0 441 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 CENPLQ8N0S6 344 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 SUN3Q8TAQ9 357 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 FAR1Q8WVX9 515 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 WDR34Q96EX3 536 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 ZNF354BQ96LW1 612 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 FMO2Q99518 471 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 REXO4Q9GZR2 422 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 RNF32Q9H0A6 362 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 TSPYL1Q9H0U9 437 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 CDC42EP4Q9H3Q1 356 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 ACSS3Q9H6R3 686 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 MMP25Q9NPA2 562 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 OPTCQ9UBM4 332 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 HIVEP3Q5T1R4 2406 aa15.74■□□□□ 0.11
CACNA1A-259ENST00000638114 A0A096LPK6 155 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 HMX2A2RU54 273 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 OR5H15A6NDH6 313 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 SYCE1LA8MT33 242 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 KIF2AO00139 706 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 ACSL3O95573 720 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 TUBB4AP04350 444 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 EPORP19235 508 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 SERPINB8P50452 374 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 SLC26A5P58743 744 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 HIST2H2ACQ16777 129 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 ACER2Q5QJU3 275 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 HIST2H2AA3Q6FI13 130 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 TRIM40Q6P9F5 258 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 RELL1Q8IUW5 271 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 BEST3Q8N1M1 668 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 ARMC2Q8NEN0 867 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 OR2L5Q8NG80 312 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 NECTIN3Q9NQS3 549 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 PRDM9Q9NQV7 894 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 ABI3Q9P2A4 366 aa15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 ZNF490Q9ULM2 529 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-259ENST00000638114 SPTBN1Q01082 2364 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 SVILO95425 2214 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 K7EPI3 171 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 B3GALT2O43825 422 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 INHBAP08476 426 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 TYK2P29597 1187 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 TAS2R50P59544 299 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 RUNX2Q13950 521 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 TBCCQ15814 346 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 INAQ16352 499 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 MEP1AQ16819 746 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 ADPRMQ3LIE5 342 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 GLE1Q53GS7 698 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 H3F3CQ6NXT2 135 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 KLC3Q6P597 504 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 CRLF3Q8IUI8 442 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 SLC5A8Q8N695 610 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 BCORP1Q8N888 145 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 ST6GALNAC3Q8NDV1 305 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 RHEBL1Q8TAI7 183 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 SSC4DQ8WTU2 575 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 UBTD2Q8WUN7 234 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 QRFPRQ96P65 431 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 NPLQ9BXD5 320 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 VPS11Q9H270 941 aa15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 COPS7BQ9H9Q2 264 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-259ENST00000638114 IGKV3D-11A0A0A0MRZ8 115 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 TCRBV16S1A1N1A0A5B0 115 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 A8MUA0 341 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 E2F3O00716 465 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 PRAMEF2O60811 474 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 KLHL2O95198 593 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 TBX6O95947 436 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 ALDOAP04075 364 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 MYBL2P10244 700 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 PCNAP12004 261 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 MTHFD2P13995 350 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 GFAPP14136 432 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 CERS1P27544 350 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 MSH2P43246 934 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 MTTPP55157 894 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 RAB38P57729 211 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 TGM3Q08188 693 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 ABHD17CQ6PCB6 329 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 TEX9Q8N6V9 391 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms