RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	STYX	Q8WUJ0	223 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	POLR2J3	Q9H1A7	115 aa	Known RBP	15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	RPLP0	P05388	317 aa	Known RBP	15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	GLDC	P23378	1020 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	CPOX	P36551	454 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	GRHL2	Q6ISB3	625 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	TRABD2A	Q86V40	505 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	CCDC116	Q8IYX3	515 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	TAMM41	Q96BW9	452 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	TSPAN6	O43657	245 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	CLDN11	O75508	207 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	TRMU	O75648	421 aa	Known RBP	15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	GTF2B	Q00403	316 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	DEFB110	Q30KQ9	67 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	MON1B	Q7L1V2	547 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	BATF2	Q8N1L9	274 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	OR5B12	Q96R08	314 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	LMF1	Q96S06	567 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	ST6GALNAC5	Q9BVH7	336 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	PPP4R1L	Q9P1A2	415 aa		15.84	■□□□□ 0.13
CACNA1A-238	ENST00000637276	DGKQ	P52824	942 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	EPHA4	P54764	986 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	FAM205BP	Q63HN1	556 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	ATOH1	Q92858	354 aa	Predicted RBP	15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	FUBP3	Q96I24	572 aa	Known RBP eCLIP	15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	DUSP26	Q9BV47	211 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	OR51B5	Q9H339	312 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	RHOJ	Q9H4E5	214 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	TBCCD1	Q9NVR7	557 aa		15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	SMPD3	Q9NY59	655 aa	Predicted RBP	15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	LSM5	Q9Y4Y9	91 aa	Known RBP	15.83	■□□□□ 0.13
CACNA1A-238	ENST00000637276	XPNPEP2	O43895	674 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	LCMT2	O60294	686 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SCO1	O75880	301 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	FGF19	O95750	216 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PRKACG	P22612	351 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ACVR1B	P36896	505 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	RPS13	P62277	151 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PSPH	P78330	225 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	HABP2	Q14520	560 aa	Predicted RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SLC36A4	Q6YBV0	504 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	DPY19L3	Q6ZPD9	716 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	OR4N5	Q8IXE1	308 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	NUSAP1	Q9BXS6	441 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	POLDIP3	Q9BY77	421 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SYNPO2L	Q9H987	977 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	LRFN1	Q9P244	771 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ATXN10	Q9UBB4	475 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	FAM170B	A6NMN3	283 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	AGPAT2	O15120	278 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	TLX2	O43763	284 aa	Predicted RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	FBL	P22087	321 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PREP	P48147	710 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	NOG	Q13253	232 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ANKDD1A	Q495B1	522 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	TEX44	Q53QW1	395 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	CTU1	Q7Z7A3	348 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ZNF681	Q96N22	645 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SLC39A1	Q9NY26	324 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	CAMK2A	Q9UQM7	478 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	MAN2B2	Q9Y2E5	1009 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	LAMTOR5	O43504	91 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SOX3	P41225	446 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	RBM34	P42696	430 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	GDPD4	Q6W3E5	623 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PHF13	Q86YI8	300 aa	Predicted RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ST7L	Q8TDW4	575 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	IL1RAP	Q9NPH3	570 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	FAM234B	A2RU67	622 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	HSBP1L1	C9JCN9	74 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	KNG1	P01042	644 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	CD36	P16671	472 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	CEACAM20	Q6UY09	585 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	MEX3B	Q6ZN04	569 aa	Known RBP	15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	NIPA1	Q7RTP0	329 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	OR10G2	Q8NGC3	310 aa		15.83	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ILVBL	A1L0T0	632 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276		H7C417	338 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	CLDN7	O95471	211 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	OAZ1	P54368	228 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	TLE1	Q04724	770 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PTPRCAP	Q14761	206 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	FLYWCH1	Q4VC44	716 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SLC44A3	Q8N4M1	653 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	MKL1	Q969V6	931 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	TAS2R3	Q9NYW6	316 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276		A0A1W2PQ45	241 aa	Predicted RBP	15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276		A0A1W2PQY0	241 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	TLR4	O00206	839 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	SCAF4	O95104	1147 aa	Known RBP	15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PRAMEF14	Q5SWL7	426 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	EEF1A1P5	Q5VTE0	462 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	PRAMEF13	Q5VWM6	474 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	MEX3D	Q86XN8	651 aa	Known RBP	15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	UBE2J1	Q9Y385	318 aa	Predicted RBP	15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	LASP1	Q14847	261 aa	Known RBP	15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	OR14J1	Q9UGF5	321 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	WNT7A	O00755	349 aa		15.82	■□□□□ 0.12
CACNA1A-238	ENST00000637276	ATP6V1G1	O75348	118 aa		15.82	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms