RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PDAP1Q13442 181 aaKnown RBP11.99□□□□□ -0.49
CTSD-208ENST00000636843 TLR1Q15399 786 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 PRMT9Q6P2P2 845 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 ISLR2Q6UXK2 745 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 ACAD11Q709F0 780 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 SLC34A3Q8N130 599 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 SPATA6LQ8N4H0 392 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 OR11G2Q8NGC1 345 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 RHEBL1Q8TAI7 183 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 HMGCLL1Q8TB92 370 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 GRHL3Q8TE85 626 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 ANKRD49Q8WVL7 239 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 FAR1Q8WVX9 515 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 LPGAT1Q92604 370 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 CMTM5Q96DZ9 223 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 THOC3Q96J01 351 aaKnown RBP11.99□□□□□ -0.49
CTSD-208ENST00000636843 FOPNLQ96NB1 174 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 LMF1Q96S06 567 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 TRMOQ9BU70 441 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 SOX17Q9H6I2 414 aaPredicted RBP11.99□□□□□ -0.49
CTSD-208ENST00000636843 TCF7L2Q9NQB0 619 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 TAS2R13Q9NYV9 303 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 GNPTGQ9UJJ9 305 aa11.99□□□□□ -0.49
CTSD-208ENST00000636843 DOCK10Q96BY6 2186 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 HYKKA2RU49 373 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 TRPC5OSA6NMA1 111 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 A8MUI8 341 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 SLC22A2O15244 555 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 CTSVO60911 334 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 SMIM24O75264 130 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 ALOX12BO75342 701 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 C1orf105O95561 183 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 HPP00738 406 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 EDN3P14138 238 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 CD1DP15813 335 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 ZNF37AP17032 561 aaPredicted RBP11.98□□□□□ -0.49
CTSD-208ENST00000636843 NCF2P19878 526 aaPredicted RBP11.98□□□□□ -0.49
CTSD-208ENST00000636843 RPS3P23396 243 aaKnown RBP eCLIP11.98□□□□□ -0.492e-22■■■■■ 30.6
CTSD-208ENST00000636843 ADSLP30566 484 aaPredicted RBP11.98□□□□□ -0.49
CTSD-208ENST00000636843 OCA2Q04671 838 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 CDC16Q13042 620 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 NAA25Q14CX7 972 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 SLC9B1Q4ZJI4 515 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 RPUSD3Q6P087 351 aaKnown RBP11.98□□□□□ -0.49
CTSD-208ENST00000636843 TMEM207Q6UWW9 146 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 SHISA6Q6ZSJ9 500 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 ISCA2Q86U28 154 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 CCNYL1Q8N7R7 359 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 L3HYPDHQ96EM0 354 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 P2RY12Q9H244 342 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 ZNF304Q9HCX3 659 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 MRGBPQ9NV56 204 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 ZNF282Q9UDV7 671 aaPredicted RBP11.98□□□□□ -0.49
CTSD-208ENST00000636843 ZDHHC2Q9UIJ5 367 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 MAU2Q9Y6X3 613 aa11.98□□□□□ -0.49
CTSD-208ENST00000636843 GOLGA8QA0A0J9YX86 632 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 GOLGA8OA6NCC3 632 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 GOLGA8NF8WBI6 632 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 E2F3O00716 465 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 ZGLP1P0C6A0 271 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 ACPPP15309 386 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 IMPDH1P20839 514 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 RAP1GDS1P52306 607 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 ADARP55265 1226 aaKnown RBP11.97□□□□□ -0.49
CTSD-208ENST00000636843 ATP6V0D1P61421 351 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 NAA20P61599 178 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 TIAL1Q01085 375 aaKnown RBP eCLIP11.97□□□□□ -0.49
CTSD-208ENST00000636843 KLC1Q07866 573 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 Q0VFX4 171 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 MFAP5Q13361 173 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 MUM1Q2TAK8 710 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 RNF44Q7L0R7 432 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 TICAM1Q8IUC6 712 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 NKAPQ8N5F7 415 aaKnown RBP11.97□□□□□ -0.49
CTSD-208ENST00000636843 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
CTSD-208ENST00000636843 OR2L3Q8NG85 312 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 OR2A1Q8NGT9 310 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 STT3BQ8TCJ2 826 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 SKA2Q8WVK7 121 aaPredicted RBP11.97□□□□□ -0.49
CTSD-208ENST00000636843 MIEF2Q96C03 454 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 SPATA7Q9P0W8 599 aa11.97□□□□□ -0.49
CTSD-208ENST00000636843 DIDO1Q9BTC0 2240 aaKnown RBP11.97□□□□□ -0.49
CTSD-208ENST00000636843 LOC105369274A0A096LPK9 316 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 LOC102723532A0A0G2JNH3 316 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 LRRTM2O43300 516 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 VPS26AO75436 327 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 PKMP14618 531 aaKnown RBP11.96□□□□□ -0.49
CTSD-208ENST00000636843 EZRP15311 586 aaKnown RBP11.96□□□□□ -0.49
CTSD-208ENST00000636843 PSMB5P28074 263 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 PGM1P36871 562 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 BDKRB1P46663 353 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 EMP3P54852 163 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 MXRA7P84157 204 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 ATG9BQ674R7 924 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 FRMPD2BQ6IN97 320 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 FAM180AQ6UWF9 173 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 FRMD7Q6ZUT3 714 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 KBTBD2Q8IY47 623 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 OR4N4Q8N0Y3 316 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms