RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ITGA7Q13683 1181 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 RAPSNQ13702 412 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PTPRCAPQ14761 206 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OPCMLQ14982 345 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PTPN14Q15678 1187 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM189A2Q15884 450 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CA9Q16790 459 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MTHFSDQ2M296 383 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 UGT3A2Q3SY77 523 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 XKR3Q5GH77 459 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 LRRC73Q5JTD7 316 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OR4A47Q6IF82 309 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC30A6Q6NXT4 461 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF343Q6P1L6 599 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 NOTUMQ6P988 496 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CYB5D1Q6P9G0 228 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PSRC1Q6PGN9 363 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 LINGO4Q6UY18 593 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PPP1R21Q6ZMI0 780 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 C11orf57Q6ZUT1 292 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 Q71RC1 249 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC24A5Q71RS6 500 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 Q7L0L9 218 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MCM10Q7L590 875 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SPATA21Q7Z572 469 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ADCK2Q7Z695 626 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PIGWQ7Z7B1 504 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 TLK2Q86UE8 772 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 AMIGO1Q86WK6 493 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 NUDT13Q86X67 352 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 METTL4Q8N3J2 472 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MARVELD2Q8N4S9 558 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ANKRD13CQ8N6S4 541 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 BMPERQ8N8U9 685 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 GBP7Q8N8V2 638 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CAMKVQ8NCB2 501 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC37A3Q8NCC5 494 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 TRIM58Q8NG06 486 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OR5AP2Q8NGF4 316 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OR10S1Q8NGN2 331 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OR10G8Q8NGN5 311 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OR2L2Q8NH16 312 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ATL1Q8WXF7 558 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 DYRK2Q92630 601 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 EXOC4Q96A65 974 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 AZIN2Q96A70 460 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 VPS33AQ96AX1 596 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 HDAC11Q96DB2 347 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 OMA1Q96E52 524 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ARSGQ96EG1 525 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SIPA1Q96FS4 1042 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PGM2Q96G03 612 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 COG3Q96JB2 828 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CAPNS2Q96L46 248 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM20AQ96MK3 541 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 GBP5Q96PP8 586 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 BTBD9Q96Q07 612 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SPAG5Q96R06 1193 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF300Q96RE9 604 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 FNBP1Q96RU3 617 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 LPAR4Q99677 370 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CPNE1Q99829 537 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 FERMT1Q9BQL6 677 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PIGQQ9BRB3 760 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 LRRC61Q9BV99 259 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC2A11Q9BYW1 496 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM129AQ9BZQ8 928 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MTMR12Q9C0I1 747 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 RIMS4Q9H426 269 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ATP13A3Q9H7F0 1226 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 TLE6Q9H808 572 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 DBNDD1Q9H9R9 158 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 C3orf14Q9HBI5 128 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CDH20Q9HBT6 801 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 RAB9BQ9NP90 201 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ANKEF1Q9NU02 776 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PRMT7Q9NVM4 692 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 BARHL2Q9NY43 387 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PKD2L2Q9NZM6 624 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 WDR35Q9P2L0 1181 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 THEGQ9P2T0 379 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CRNNQ9UBG3 495 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MORF4L1Q9UBU8 362 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 POLLQ9UGP5 575 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 IL17BQ9UHF5 180 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC12A6Q9UHW9 1150 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MUTYHQ9UIF7 546 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PLCL2Q9UPR0 1127 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 NCKAP1Q9Y2A7 1128 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 NME7Q9Y5B8 376 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SELENOKQ9Y6D0 94 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CSNK1G3Q9Y6M4 447 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 TECTAO75443 2155 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CHD5Q8TDI0 1954 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PI4KAP42356 2102 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 LRP4O75096 1905 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PCNTO95613 3336 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PLXND1Q9Y4D7 1925 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CEMIPQ8WUJ3 1361 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 KIF7Q2M1P5 1343 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms