RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 RETREG1Q9H6L5 497 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 NRBP2Q9NSY0 501 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 C2orf42Q9NWW7 574 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 CHCHD3Q9NX63 227 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 DDX43Q9NXZ2 648 aaKnown RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MTRRQ9UBK8 725 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 LEF1Q9UJU2 399 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 LIPT1Q9Y234 373 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 KLHL20Q9Y2M5 609 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 PRG3Q9Y2Y8 225 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MMP24Q9Y5R2 645 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SNX5Q9Y5X3 404 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MYH11P35749 1972 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 MUC22E2RYF6 1773 aaPredicted RBP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SCN1AP35498 2009 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 RALGAPA1Q6GYQ0 2036 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 SF3B1O75533 1304 aaKnown RBP eCLIP2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TEX15Q9BXT5 2789 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 APC2O95996 2303 aa2.35□□□□□ -2.03
SMARCB1-208ENST00000634926 TP53BP1Q12888 1972 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 UTP20O75691 2785 aaKnown RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A0U1RQK1 487 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A1B0GUV1 79 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A1W2PPQ1 181 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 hDV102S1A0JD36 115 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 FEZF1A0PJY2 475 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF320A2RRD8 509 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 OR2M5A3KFT3 312 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 OR6C75A6NL08 312 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 INAFM1C9JVW0 142 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 H0YAE9 185 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PLK4O00444 970 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 DVL1O14640 695 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC30A4O14863 429 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 XRCC3O43542 346 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PFKFB2O60825 505 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ERLIN2O94905 339 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 GOSR1O95249 250 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 SEC24AO95486 1093 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 GBAP04062 536 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 RAB40ALP0C0E4 278 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 OR2T7P0C7T2 308 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 IGHV4-30-4P0DP06 118 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ADRA2CP18825 462 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 C21orf33P30042 268 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 GABRA5P31644 462 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ASCL1P50553 236 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 DSCR9P59020 149 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 HNRNPKP61978 463 aaKnown RBP eCLIP2.34□□□□□ -2.034e-10■■■■□ 21
SMARCB1-208ENST00000634926 ABATP80404 500 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 YWHAHQ04917 246 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 FCHO2Q0JRZ9 810 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 Q0VFX4 171 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PTK6Q13882 451 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 MXD4Q14582 209 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 MORF4L2Q15014 288 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 NONOQ15233 471 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 OASLQ15646 514 aaKnown RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PSMD5Q16401 504 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 NHSL2Q5HYW2 709 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 SFMBT2Q5VUG0 894 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ALS2CLQ60I27 953 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 C8orf82Q6P1X6 216 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PLBD1Q6P4A8 553 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM122CQ6P4D5 195 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 WDR73Q6P4I2 378 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PRSS57Q6UWY2 283 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 VITQ6UXI7 678 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 LINC00696Q6ZRV3 163 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ZBTB49Q6ZSB9 765 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 C11orf57Q6ZUT1 292 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 Q75L30 129 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 RUFY3Q7L099 469 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CENPQQ7L2Z9 268 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 TRMT1LQ7Z2T5 733 aaKnown RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ABI3BPQ7Z7G0 1075 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CDR2LQ86X02 465 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CEP57L1Q8IYX8 460 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CARNMT1Q8N4J0 409 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ACVR1CQ8NER5 493 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 C9orf43Q8TAL5 461 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 FIBINQ8TAL6 211 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 HMGCLL1Q8TB92 370 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 GRK7Q8WTQ7 553 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 TCP11Q8WWU5 503 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CORO2AQ92828 525 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 PTP4A1Q93096 173 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 SPSB1Q96BD6 273 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 ELSPBP1Q96BH3 223 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CPB2Q96IY4 423 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CEP170P1Q96L14 293 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 MUS81Q96NY9 551 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 QRFPRQ96P65 431 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 MTERF1Q99551 399 aaKnown RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 SEPHS2Q99611 448 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 CMKLR1Q99788 373 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 FUT8Q9BYC5 575 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 POLR3FQ9H1D9 316 aaPredicted RBP2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 MFSD1Q9H3U5 465 aa2.34□□□□□ -2.03
SMARCB1-208ENST00000634926 HHATLQ9HCP6 504 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms