RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 COLEC12Q5KU26 742 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 UBAP2Q5T6F2 1119 aaKnown RBP21.03■□□□□ 0.96
SF1-220ENST00000626028 LIPJQ5W064 366 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 MED27Q6P2C8 311 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 LANCL3Q6ZV70 420 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 ARMC2Q8NEN0 867 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 DNAJB14Q8TBM8 379 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 BRIX1Q8TDN6 353 aaKnown RBP21.03■□□□□ 0.96
SF1-220ENST00000626028 DCAKDQ8WVC6 231 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 CCT6BQ92526 530 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 HAS2Q92819 552 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 MTBPQ96DY7 904 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 KCNC2Q96PR1 638 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 AICDAQ9GZX7 198 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 VPS11Q9H270 941 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 PRDM9Q9NQV7 894 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 MMACHCQ9Y4U1 282 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 ASB1Q9Y576 335 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 PCDHGA10Q9Y5H3 936 aa21.03■□□□□ 0.96
SF1-220ENST00000626028 EXOC1LA0A1B0GW35 172 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 SNRPAP09012 282 aaKnown RBP21.02■□□□□ 0.96
SF1-220ENST00000626028 TSFMP43897 325 aaKnown RBP21.02■□□□□ 0.96
SF1-220ENST00000626028 GLRBP48167 497 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 ZNF169Q14929 603 aaPredicted RBP21.02■□□□□ 0.96
SF1-220ENST00000626028 PFKFB4Q16877 469 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 TECRLQ5HYJ1 363 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 GRHL2Q6ISB3 625 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 H3F3CQ6NXT2 135 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 RPUSD3Q6P087 351 aaKnown RBP21.02■□□□□ 0.96
SF1-220ENST00000626028 VN1R5Q7Z5H4 357 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 LCA5Q86VQ0 697 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 C7orf57Q8NEG2 295 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 QRFPRQ96P65 431 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 SERINC2Q96SA4 455 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 BARD1Q99728 777 aaKnown RBP21.02■□□□□ 0.96
SF1-220ENST00000626028 L2HGDHQ9H9P8 463 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 MMP25Q9NPA2 562 aa21.02■□□□□ 0.96
SF1-220ENST00000626028 POC1B-GALNT4F8VUJ3 575 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 B3GALT2O43825 422 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 CDC123O75794 336 aaPredicted RBP21.01■□□□□ 0.95
SF1-220ENST00000626028 SEC24DO94855 1032 aaPredicted RBP21.01■□□□□ 0.95
SF1-220ENST00000626028 TBX6O95947 436 aaPredicted RBP21.01■□□□□ 0.95
SF1-220ENST00000626028 MYBL2P10244 700 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 ARFIP1P53367 373 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 MTTPP55157 894 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 ACTN3Q08043 901 aaPredicted RBP21.01■□□□□ 0.95
SF1-220ENST00000626028 BTBD16Q32M84 506 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 SFT2D3Q587I9 215 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 ABHD17CQ6PCB6 329 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 CHSY3Q70JA7 882 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 CUZD1Q86UP6 607 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 CA13Q8N1Q1 262 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.01■□□□□ 0.952e-6■■□□□ 12.7
SF1-220ENST00000626028 PTGFRNQ9P2B2 879 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 MRPS33Q9Y291 106 aaKnown RBP21.01■□□□□ 0.95
SF1-220ENST00000626028 ANGPTL3Q9Y5C1 460 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 PCDHGA11Q9Y5H2 935 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 RELNP78509 3460 aa21.01■□□□□ 0.95
SF1-220ENST00000626028 FLNBO75369 2602 aaKnown RBP21.01■□□□□ 0.95
SF1-220ENST00000626028 LRRK2Q5S007 2527 aa21■□□□□ 0.95
SF1-220ENST00000626028 IGKV3D-11A0A0A0MRZ8 115 aa21■□□□□ 0.95
SF1-220ENST00000626028 TCRBV16S1A1N1A0A5B0 115 aa21■□□□□ 0.95
SF1-220ENST00000626028 CLEC18AA5D8T8 446 aa21■□□□□ 0.95
SF1-220ENST00000626028 C4orf51C9J302 202 aa21■□□□□ 0.95
SF1-220ENST00000626028 CLDN4O14493 209 aa21■□□□□ 0.95
SF1-220ENST00000626028 RIPK2O43353 540 aa21■□□□□ 0.95
SF1-220ENST00000626028 B3GALT4O96024 378 aa21■□□□□ 0.95
SF1-220ENST00000626028 RHOXF2BP0C7M4 288 aa21■□□□□ 0.95
SF1-220ENST00000626028 ITGAMP11215 1152 aa21■□□□□ 0.95
SF1-220ENST00000626028 PIK3CBP42338 1070 aa21■□□□□ 0.95
SF1-220ENST00000626028 HSD17B7P56937 341 aa21■□□□□ 0.95
SF1-220ENST00000626028 OR4D2P58180 307 aa21■□□□□ 0.95
SF1-220ENST00000626028 OLR1P78380 273 aa21■□□□□ 0.95
SF1-220ENST00000626028 TERF2Q15554 542 aa21■□□□□ 0.95
SF1-220ENST00000626028 ABHD17BQ5VST6 288 aa21■□□□□ 0.95
SF1-220ENST00000626028 PAPD4Q6PIY7 484 aaKnown RBP21■□□□□ 0.95
SF1-220ENST00000626028 ADGRD1Q6QNK2 874 aa21■□□□□ 0.95
SF1-220ENST00000626028 CLEC18BQ6UXF7 455 aa21■□□□□ 0.95
SF1-220ENST00000626028 TIFABQ6ZNK6 161 aa21■□□□□ 0.95
SF1-220ENST00000626028 LINC00696Q6ZRV3 163 aa21■□□□□ 0.95
SF1-220ENST00000626028 LGI4Q8N135 537 aa21■□□□□ 0.95
SF1-220ENST00000626028 TEX9Q8N6V9 391 aa21■□□□□ 0.95
SF1-220ENST00000626028 CLEC18CQ8NCF0 446 aa21■□□□□ 0.95
SF1-220ENST00000626028 OR7G3Q8NG95 312 aa21■□□□□ 0.95
SF1-220ENST00000626028 ZNF473Q8WTR7 871 aaKnown RBP21■□□□□ 0.95
SF1-220ENST00000626028 REPS1Q96D71 796 aa21■□□□□ 0.95
SF1-220ENST00000626028 SNRNP40Q96DI7 357 aaKnown RBP21■□□□□ 0.95
SF1-220ENST00000626028 CMTM7Q96FZ5 175 aa21■□□□□ 0.95
SF1-220ENST00000626028 PTCHD1Q96NR3 888 aa21■□□□□ 0.95
SF1-220ENST00000626028 RHOXF2Q9BQY4 288 aa21■□□□□ 0.95
SF1-220ENST00000626028 TBCDQ9BTW9 1192 aa21■□□□□ 0.95
SF1-220ENST00000626028 RBCK1Q9BYM8 510 aa21■□□□□ 0.95
SF1-220ENST00000626028 COPS7BQ9H9Q2 264 aaPredicted RBP21■□□□□ 0.95
SF1-220ENST00000626028 AGPAT4Q9NRZ5 378 aa21■□□□□ 0.95
SF1-220ENST00000626028 SVILO95425 2214 aa20.99■□□□□ 0.95
SF1-220ENST00000626028 BLACEA4D250 179 aa20.99■□□□□ 0.95
SF1-220ENST00000626028 OR2W5A6NFC9 320 aa20.99■□□□□ 0.95
SF1-220ENST00000626028 TRIM49D1C9J1S8 452 aa20.99■□□□□ 0.95
SF1-220ENST00000626028 STX16-NPEPL1H3BU86 382 aa20.99■□□□□ 0.95
SF1-220ENST00000626028 STX16O14662 325 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms