RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZNF766Q5HY98 468 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 PAGE2BQ5JRK9 111 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 ZNF324BQ6AW86 544 aaPredicted RBP10.17□□□□□ -0.78
SSBP4-215ENST00000625926 HIST2H2AA3Q6FI13 130 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 TUBA3EQ6PEY2 450 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 CEP128Q6ZU80 1094 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 LRRC70Q7Z2Q7 622 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 CCDC91Q7Z6B0 441 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 CMC1Q7Z7K0 106 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 ISCA2Q86U28 154 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 CRLF3Q8IUI8 442 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 OR2L5Q8NG80 312 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 ELP5Q8TE02 316 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 NR4A3Q92570 626 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 EXT2Q93063 718 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 MS4A6EQ96DS6 147 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 WDR34Q96EX3 536 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 UTP23Q9BRU9 249 aaKnown RBP10.17□□□□□ -0.78
SSBP4-215ENST00000625926 EFCAB11Q9BUY7 163 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 REXO4Q9GZR2 422 aaKnown RBP10.17□□□□□ -0.78
SSBP4-215ENST00000625926 AICDAQ9GZX7 198 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 ALG9Q9H6U8 611 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 NUDT4Q9NZJ9 180 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 ZNF490Q9ULM2 529 aaPredicted RBP10.17□□□□□ -0.78
SSBP4-215ENST00000625926 OSGIN2Q9Y236 505 aa10.17□□□□□ -0.78
SSBP4-215ENST00000625926 A0A087X1B8 175 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 IGKV3D-11A0A0A0MRZ8 115 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 A0A0G2JN53 185 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 TCRBV16S1A1N1A0A5B0 115 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 CLDN4O14493 209 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 LRRTM2O43300 516 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 B3GALT2O43825 422 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 PRAMEF4O60810 478 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 HNRNPH1P31943 449 aaKnown RBP10.16□□□□□ -0.78
SSBP4-215ENST00000625926 PHBP35232 272 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 GMPRP36959 345 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 CD96P40200 585 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 PLA2G16P53816 162 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 TGM3Q08188 693 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 DLG1Q12959 904 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 CHIT1Q13231 466 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 RUNX2Q13950 521 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 RCN2Q14257 317 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 EFTUD2Q15029 972 aaKnown RBP eCLIP10.16□□□□□ -0.783e-6■■■■■ 40.3
SSBP4-215ENST00000625926 OR1C1Q15619 314 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 TBCCQ15814 346 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 ADPRMQ3LIE5 342 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 PRAMEF9Q5VWM5 478 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 TRIM40Q6P9F5 258 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 ABHD17CQ6PCB6 329 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 VN1R5Q7Z5H4 357 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 RPS19BP1Q86WX3 136 aaKnown RBP10.16□□□□□ -0.78
SSBP4-215ENST00000625926 LGI4Q8N135 537 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 HORMAD2Q8N7B1 307 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 ADAMTS18Q8TE60 1221 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 UBE2E3Q969T4 207 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 MRRFQ96E11 262 aaKnown RBP10.16□□□□□ -0.78
SSBP4-215ENST00000625926 C16orf45Q96MC5 204 aaPredicted RBP10.16□□□□□ -0.78
SSBP4-215ENST00000625926 NPAS2Q99743 824 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 CDCP1Q9H5V8 836 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 NECTIN3Q9NQS3 549 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 ZDHHC18Q9NUE0 388 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 ANKRD10Q9NXR5 420 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 MTRF1LQ9UGC7 380 aaKnown RBP10.16□□□□□ -0.78
SSBP4-215ENST00000625926 MMACHCQ9Y4U1 282 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 PCDHGB6Q9Y5F9 930 aa10.16□□□□□ -0.78
SSBP4-215ENST00000625926 A0A1B0GUH1 482 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 CCDC189A1A4V9 331 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 A1L4Q6 167 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SAGE2PA6NJ88 616 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 GABRR3A8MPY1 467 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SYCE1LA8MT33 242 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 A8MUA0 341 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SUPT3HB4E1H0 165 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 MAN1A2O60476 641 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 KERAO60938 352 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SUPT3HO75486 399 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 TBX6O95947 436 aaPredicted RBP10.15□□□□□ -0.78
SSBP4-215ENST00000625926 C2P06681 752 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 STSP08842 583 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 CD46P15529 392 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 EPORP19235 508 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 CD22P20273 847 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 CASP2P42575 452 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 TDGF1P3P51864 188 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 MTTPP55157 894 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 PER3P56645 1201 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 HSD17B7P56937 341 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 RAB38P57729 211 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 OC90Q02509 493 aaPredicted RBP10.15□□□□□ -0.78
SSBP4-215ENST00000625926 FAM83EQ2M2I3 478 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 MROH9Q5TGP6 573 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SPINK14Q6IE38 97 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 GFRALQ6UXV0 394 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 ZNF595Q8IYB9 648 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 KIF2BQ8N4N8 673 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 MMGT1Q8N4V1 131 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 MDS2Q8NDY4 140 aa10.15□□□□□ -0.78
SSBP4-215ENST00000625926 SRFBP1Q8NEF9 429 aaKnown RBP10.15□□□□□ -0.78
SSBP4-215ENST00000625926 RHEBL1Q8TAI7 183 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms