RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 PPP1R3AQ16821 1122 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 BBS9Q3SYG4 887 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 TOR1AIP1Q5JTV8 583 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 NXPE4Q6UWF7 544 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 THOC6Q86W42 341 aaKnown RBP13.51□□□□□ -0.25
TUBB3-215ENST00000625617 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 SULF2Q8IWU5 870 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 CA13Q8N1Q1 262 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 APCDD1LQ8NCL9 501 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 KLHL31Q9H511 634 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 ZFATQ9P243 1243 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 KCNE2Q9Y6J6 123 aa13.51□□□□□ -0.25
TUBB3-215ENST00000625617 ADGRG4Q8IZF6 3080 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 POLQO75417 2590 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 PCNX1Q96RV3 2341 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 NPEPPSL1A6NEC2 478 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 DNALI1O14645 258 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 ITGA10O75578 1167 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 SMIM10L1P0DMW3 83 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 ZNF37AP17032 561 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 TFEBP19484 476 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 MSS51Q4VC12 460 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 CMPK2Q5EBM0 449 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 TEDDM1Q5T9Z0 273 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 ARHGAP11AQ6P4F7 1023 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 ASB5Q8WWX0 329 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 GAL3ST3Q96A11 431 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 CFAP36Q96G28 342 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 SMIM10Q96HG1 83 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 EGFL8Q99944 293 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 TREX2Q9BQ50 279 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 TIMMDC1Q9NPL8 285 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 PNO1Q9NRX1 252 aaKnown RBP13.5□□□□□ -0.25
TUBB3-215ENST00000625617 IKZF3Q9UKT9 509 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 SLC22A14Q9Y267 594 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 VWA7Q9Y334 891 aa13.5□□□□□ -0.25
TUBB3-215ENST00000625617 FAM90A27PA6NNH2 459 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 TUBB4AP04350 444 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 SAT1P21673 171 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 CHRNB4P30926 498 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 SSR4P51571 173 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 BTN3A2P78410 334 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 TESK1Q15569 626 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 TMEM211Q6ICI0 200 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 TRMT10BQ6PF06 316 aaKnown RBP13.49□□□□□ -0.25
TUBB3-215ENST00000625617 CEP128Q6ZU80 1094 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 MDGA2Q7Z553 956 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 IGDCC3Q8IVU1 814 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 SCUBE1Q8IWY4 988 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 MARVELD2Q8N4S9 558 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 TTLQ8NG68 377 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 ACTRT1Q8TDG2 376 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 CREB3L4Q8TEY5 395 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 CCT6BQ92526 530 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 NCLNQ969V3 563 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 PDLIM5Q96HC4 596 aaKnown RBP13.49□□□□□ -0.25
TUBB3-215ENST00000625617 FAR2Q96K12 515 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 OSBPL9Q96SU4 736 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 CCDC77Q9BR77 488 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 TP63Q9H3D4 680 aaPredicted RBP13.49□□□□□ -0.25
TUBB3-215ENST00000625617 PLAC1Q9HBJ0 212 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 PRTFDC1Q9NRG1 225 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 ZNF223Q9UK11 482 aaPredicted RBP13.49□□□□□ -0.25
TUBB3-215ENST00000625617 ERVK-11Q9UQG0 969 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 CHMP2BQ9UQN3 213 aa13.49□□□□□ -0.25
TUBB3-215ENST00000625617 SCN3AQ9NY46 2000 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 A0A088AWK7 358 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 A0A0G2JN53 185 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 USP27XA6NNY8 438 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 A8MVJ9 347 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 ACOT7O00154 380 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 CLDN4O14493 209 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 ERI3O43414 337 aaKnown RBP13.48□□□□□ -0.25
TUBB3-215ENST00000625617 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
TUBB3-215ENST00000625617 PPP2R1BP30154 601 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 CDKL1Q00532 357 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 SLC13A2Q13183 592 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 SLBPQ14493 270 aaKnown RBP eCLIP13.48□□□□□ -0.25
TUBB3-215ENST00000625617 SPNS3Q6ZMD2 512 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 ADAMTSL2Q86TH1 951 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 GPALPP1Q8IXQ4 340 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 PDIK1LQ8N165 341 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 FAM47BQ8NA70 645 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 PSD4Q8NDX1 1056 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 AICDAQ9GZX7 198 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 ADAP2Q9NPF8 381 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 KCMF1Q9P0J7 381 aa13.48□□□□□ -0.25
TUBB3-215ENST00000625617 PPIEQ9UNP9 301 aaKnown RBP13.48□□□□□ -0.25
TUBB3-215ENST00000625617 MRPS33Q9Y291 106 aaKnown RBP13.48□□□□□ -0.25
TUBB3-215ENST00000625617 CACNA1CQ13936 2221 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms