RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 MSS51Q4VC12 460 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 DUPD1Q68J44 220 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 KIAA0408Q6ZU52 694 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 LMNTD2Q8IXW0 634 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 POGLUT1Q8NBL1 392 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
DDX41-218ENST00000625286 FBXL8Q96CD0 374 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 TSNARE1Q96NA8 513 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 HAUS8Q9BT25 410 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 DEFB126Q9BYW3 111 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 XAB2Q9HCS7 855 aaKnown RBP10.29□□□□□ -0.76
DDX41-218ENST00000625286 PRDM9Q9NQV7 894 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 ARL15Q9NXU5 204 aa10.29□□□□□ -0.76
DDX41-218ENST00000625286 PPIEQ9UNP9 301 aaKnown RBP10.29□□□□□ -0.76
DDX41-218ENST00000625286 MYOCOSA0A1B0GUC4 107 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 KLRC4-KLRK1H3BQV0 150 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 MYO1DO94832 1006 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 GUCA1CO95843 209 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 HOXD4P09016 255 aaPredicted RBP10.28□□□□□ -0.76
DDX41-218ENST00000625286 HOXB4P17483 251 aaPredicted RBP10.28□□□□□ -0.76
DDX41-218ENST00000625286 JAK1P23458 1154 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 CDC25BP30305 580 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 CHRNB4P30926 498 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 DNAJA1P31689 397 aaKnown RBP10.28□□□□□ -0.76
DDX41-218ENST00000625286 AHRP35869 848 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 ART1P52961 327 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 DLX5P56178 289 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 REEP5Q00765 189 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 CRYMQ14894 314 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 PPP1R3AQ16821 1122 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 C18orf21Q32NC0 220 aaPredicted RBP10.28□□□□□ -0.76
DDX41-218ENST00000625286 GXYLT1Q4G148 440 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 RTL6Q6ICC9 239 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 SBSNQ6UWP8 590 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 ZNF662Q6ZS27 426 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 LIX1LQ8IVB5 337 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 SCUBE1Q8IWY4 988 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 CYP4Z2PQ8N1L4 340 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 RASGEF1CQ8N431 466 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDX41-218ENST00000625286 B3GNT7Q8NFL0 401 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 CALML6Q8TD86 181 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 MAIP1Q8WWC4 291 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 SLC5A11Q8WWX8 675 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 MAGOHBQ96A72 148 aaKnown RBP10.28□□□□□ -0.76
DDX41-218ENST00000625286 TMEM125Q96AQ2 219 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 SEC16BQ96JE7 1060 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 LIME1Q9H400 295 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 HOMER3Q9NSC5 361 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 PNPLA3Q9NST1 481 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 TAS2R13Q9NYV9 303 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 COQ3Q9NZJ6 369 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 KCMF1Q9P0J7 381 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 KLF13Q9Y2Y9 288 aaPredicted RBP10.28□□□□□ -0.76
DDX41-218ENST00000625286 LIPGQ9Y5X9 500 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 MPDZO75970 2070 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 NCKAP5O14513 1909 aa10.28□□□□□ -0.76
DDX41-218ENST00000625286 A0A0G2JN53 185 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 FAM166BA8MTA8 275 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 FCHO1O14526 889 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 OR6B1O95007 311 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 HIST1H2AGP0C0S8 130 aaPredicted RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 RNH1P13489 461 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 HIST1H2ADP20671 130 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 HNRNPH1P31943 449 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 RGS4P49798 205 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 CLCN2P51788 898 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 IST1P53990 364 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 BTN3A2P78410 334 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 CSHL1Q14406 222 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 CYP1B1Q16678 543 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 TOR1AIP1Q5JTV8 583 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 RNASEH2BQ5TBB1 312 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 LRRC8EQ6NSJ5 796 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 NXPE4Q6UWF7 544 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 ABHD13Q7L211 337 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 THOC6Q86W42 341 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 CNTN4Q8IWV2 1026 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 ZNF321PQ8N8H1 164 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 OR5M9Q8NGP3 310 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 RND1Q92730 232 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 NCLNQ969V3 563 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 HIST1H2AHQ96KK5 128 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 QRFPRQ96P65 431 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 HIST1H2AJQ99878 128 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 WDR83Q9BRX9 315 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 FAM167BQ9BTA0 163 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 H2AFJQ9BTM1 129 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 TP63Q9H3D4 680 aaPredicted RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 ZDHHC11Q9H8X9 412 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 PNO1Q9NRX1 252 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 FBXW2Q9UKT8 454 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 SLC22A14Q9Y267 594 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 FAM215AQ9Y5M1 114 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.77
DDX41-218ENST00000625286 FREM3P0C091 2139 aa10.27□□□□□ -0.77
DDX41-218ENST00000625286 NPIPA2E9PIF3 369 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms