RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 A3GALT2U3KPV4 340 aa14.59□□□□□ -0.07
LINC00552-201ENST00000625151 PCDH17O14917 1159 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 DLGAP3O95886 979 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 NAT1P18440 290 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 SLC7A9P82251 487 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 FOXD4Q12950 439 aaPredicted RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 IRF3Q14653 427 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 GCNT6Q5T4J0 391 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 GDPD4Q6W3E5 623 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 TMPRSS11BQ86T26 416 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 RAVER1Q8IY67 606 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 SYTL1Q8IYJ3 562 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 DENND6BQ8NEG7 585 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 OR56A3Q8NH54 315 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 RIOK2Q9BVS4 552 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 MS4A12Q9NXJ0 267 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 CCDC59Q9P031 241 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 SLC25A13Q9UJS0 675 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 POU2F3Q9UKI9 436 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 CFAP20Q9Y6A4 193 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 RANBP2P49792 3224 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 PLXND1Q9Y4D7 1925 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 A8MU76 341 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 LEFTY2O00292 366 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 AP2A2O94973 939 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 DNTTP04053 509 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 GSTT2P0CG29 244 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 GSTT2BP0CG30 244 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 MPEG1Q2M385 716 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 C1orf53Q5VUE5 145 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 PNCKQ6P2M8 343 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 RASGEF1AQ8N9B8 481 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 LMNTD1Q8N9Z9 388 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 B3GNT7Q8NFL0 401 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 KBTBD8Q8NFY9 601 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 OR5AK3PQ8NH89 298 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 GOT1L1Q8NHS2 421 aaPredicted RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 GTPBP3Q969Y2 492 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 TMEM159Q96B96 161 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 BHLHE41Q9C0J9 482 aaPredicted RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 REEP4Q9H6H4 257 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 TRIM39Q9HCM9 518 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 THSD1Q9NS62 852 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 ATP6V1HQ9UI12 483 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 DUSP12Q9UNI6 340 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 SH2B3Q9UQQ2 575 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 IFT52Q9Y366 437 aa14.58□□□□□ -0.08
LINC00552-201ENST00000625151 RBMX2Q9Y388 322 aaKnown RBP14.58□□□□□ -0.08
LINC00552-201ENST00000625151 SAP18O00422 153 aaKnown RBP14.57□□□□□ -0.08
LINC00552-201ENST00000625151 CATP04040 527 aaKnown RBP14.57□□□□□ -0.08
LINC00552-201ENST00000625151 URODP06132 367 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 PDHA2P29803 388 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 DOC2BQ14184 412 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 FBXO43Q4G163 708 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 ATAD3BQ5T9A4 648 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 NLGN4XQ8N0W4 816 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 DEPDC4Q8N2C3 294 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 SCAIQ8N9R8 606 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 OR52N2Q8NGI0 321 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 OR2A12Q8NGT7 310 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00552-201ENST00000625151 OR5M11Q96RB7 305 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 C1GALT1Q9NS00 363 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 ACER3Q9NUN7 267 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 IMPAD1Q9NX62 359 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 CDH23Q9H251 3354 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 PRAMEF33A0A0G2JMD5 474 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 A0A1W2PRU2 124 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 GRM6O15303 877 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 PRAMEF10O60809 474 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 VIPR1P32241 457 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 S100A5P33763 92 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 POLR2LP62875 67 aaKnown RBP14.57□□□□□ -0.08
LINC00552-201ENST00000625151 PRKCDQ05655 676 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 PCDH1Q08174 1060 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 ZNF763Q0D2J5 394 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 GANABQ14697 944 aaKnown RBP14.57□□□□□ -0.08
LINC00552-201ENST00000625151 HENMT1Q5T8I9 393 aaKnown RBP14.57□□□□□ -0.08
LINC00552-201ENST00000625151 SLCO4C1Q6ZQN7 724 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 HEATR4Q86WZ0 1026 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 KLHDC8AQ8IYD2 350 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 SLC39A11Q8N1S5 342 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 TXNDC15Q96J42 360 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 FAM129BQ96TA1 746 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 ROGDIQ9GZN7 287 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 MAPRE3Q9UPY8 281 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 MAP4K5Q9Y4K4 846 aa14.57□□□□□ -0.08
LINC00552-201ENST00000625151 MTCL1Q9Y4B5 1905 aaKnown RBP14.56□□□□□ -0.08
LINC00552-201ENST00000625151 SNPHO15079 494 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 TEX28O15482 410 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 CLTBP09497 229 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 ZNF30P17039 623 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 ALOX12P18054 663 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 PRIM2P49643 509 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 UGT2B15P54855 530 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 ZNF45Q02386 682 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 TEKQ02763 1124 aa14.56□□□□□ -0.08
LINC00552-201ENST00000625151 EEF1A2Q05639 463 aaKnown RBP14.56□□□□□ -0.08
LINC00552-201ENST00000625151 FCHO2Q0JRZ9 810 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms