RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 EBF1Q9UH73 591 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 EXO1Q9UQ84 846 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 F5P12259 2224 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SAC3D1A6NKF1 404 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SAP18O00422 153 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 PDPK1O15530 556 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 NARSO43776 548 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 SH3BGRLO75368 114 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 PRKD3O94806 890 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 CST1P01037 141 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 CKMT2P17540 419 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 ZNF10P21506 573 aaPredicted RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 CHI3L1P36222 383 aaPredicted RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 FRKP42685 505 aaPredicted RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 SSR2P43308 183 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 RPS9P46781 194 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 ANXA11P50995 505 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 ALDH3A2P51648 485 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 HBA1P69905 142 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 RGS1Q08116 209 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 GK3PQ14409 553 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 GCNT6Q5T4J0 391 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 BHLHB9Q6PI77 547 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 CBLL1Q75N03 491 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 RD3Q7Z3Z2 195 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.6■□□□□ 0.09
LDB3-208ENST00000623007 CHERPQ8IWX8 916 aaKnown RBP15.6■□□□□ 0.09
LDB3-208ENST00000623007 NETO1Q8TDF5 533 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 LZICQ8WZA0 190 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 TFAP2CQ92754 450 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 TM4SF18Q96CE8 201 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 DPH7Q9BTV6 452 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SLC6A16Q9GZN6 736 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 CHRDQ9H2X0 955 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 XKR8Q9H6D3 395 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 ZNF696Q9H7X3 374 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 WNT16Q9UBV4 365 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 USP22Q9UPT9 525 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 PLEKHM1Q9Y4G2 1056 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 PCDHGA4Q9Y5G9 962 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 KLK4Q9Y5K2 254 aa15.6■□□□□ 0.09
LDB3-208ENST00000623007 SPTY2D1-AS1A0A0U1RR47 76 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 A0A1W2PPC4 97 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 FEZF1A0PJY2 475 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 G3V2T6 193 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 SOCS2O14508 198 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 ACOX3O15254 700 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 ZW10O43264 779 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 TNFSF14O43557 240 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 VIPP01282 170 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 IGHV4-34P06331 123 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 UBTFL6P0CB48 400 aaPredicted RBP15.59■□□□□ 0.09
LDB3-208ENST00000623007 MERTKQ12866 999 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 MANEAQ5SRI9 462 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 IYDQ6PHW0 289 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 IQCHQ86VS3 1027 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 CARM1Q86X55 608 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 SAMD14Q8IZD0 417 aaPredicted RBP15.59■□□□□ 0.09
LDB3-208ENST00000623007 DHRSXQ8N5I4 330 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 METTL25Q8N6Q8 603 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 OR5K1Q8NHB7 308 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 TSACCQ96A04 125 aaPredicted RBP15.59■□□□□ 0.09
LDB3-208ENST00000623007 NRBF2Q96F24 287 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 SLC29A1Q99808 456 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 RBM4BQ9BQ04 359 aaKnown RBP15.59■□□□□ 0.09
LDB3-208ENST00000623007 RBM4Q9BWF3 364 aaKnown RBP15.59■□□□□ 0.09
LDB3-208ENST00000623007 TMEM168Q9H0V1 697 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 CHST8Q9H2A9 424 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 LMAN1LQ9HAT1 526 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 IL1RAPQ9NPH3 570 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 LYARQ9NX58 379 aaKnown RBP15.59■□□□□ 0.09
LDB3-208ENST00000623007 USE1Q9NZ43 259 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 ATG2BQ96BY7 2078 aa15.59■□□□□ 0.09
LDB3-208ENST00000623007 A0A0A6YYD5 115 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 IGKV1-8A0A0C4DH67 115 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 C7orf72A4D263 438 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 NOBOXO60393 691 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 C6orf47O95873 294 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 TBX6O95947 436 aaPredicted RBP15.58■□□□□ 0.08
LDB3-208ENST00000623007 SLC35G6P0C7Q6 338 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 PRIM2P49643 509 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 RPS6KA3P51812 740 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 CYP4F2P78329 520 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 DAG1Q14118 895 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 PLCL1Q15111 1095 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 ZNF385BQ569K4 471 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 ANKRD26P1Q6NSI1 321 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 SLC30A9Q6PML9 568 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 PIWIL3Q7Z3Z3 882 aaKnown RBP15.58■□□□□ 0.08
LDB3-208ENST00000623007 PTOV1Q86YD1 416 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 EPHX4Q8IUS5 362 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 SDR16C5Q8N3Y7 309 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 ZNF655Q8N720 491 aaPredicted RBP15.58■□□□□ 0.08
LDB3-208ENST00000623007 CADM4Q8NFZ8 388 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 PSMA8Q8TAA3 256 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 NT5CQ8TCD5 201 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 MOAP1Q96BY2 351 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 CNBD2Q96M20 576 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 ADI1Q9BV57 179 aa15.58■□□□□ 0.08
LDB3-208ENST00000623007 YTHDF1Q9BYJ9 559 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms