RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TUBGCP3Q96CW5 907 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 MVB12AQ96EY5 273 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 C11orf24Q96F05 449 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 NAF1Q96HR8 494 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 PPP1R36Q96LQ0 422 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 PPP3R2Q96LZ3 170 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 DCBLD2Q96PD2 775 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 C17orf62Q9BQA9 187 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF717Q9BY31 904 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 MRPL1Q9BYD6 325 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 NSRP1Q9H0G5 558 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 LRTM1Q9HBL6 345 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 LHX9Q9NQ69 397 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 C1orf109Q9NX04 203 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 SIRT5Q9NXA8 310 aa18.83■□□□□ 0.6
PDLIM2-221ENST00000622702 SAP18O00422 153 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 SCELO95171 688 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 HBQ1P09105 142 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 BSGP35613 385 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 EIF2S3P41091 472 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 PLA2G16P53816 162 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 RAB8AP61006 207 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 KIAA0040Q15053 153 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 SLC9B1Q4ZJI4 515 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 ATP6AP1LQ52LC2 224 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 RHBDD2Q6NTF9 364 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 ZFAND4Q86XD8 727 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 RFWD2Q8NHY2 731 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 APIPQ96GX9 242 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 QRFPRQ96P65 431 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 ROGDIQ9GZN7 287 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 EPN3Q9H201 632 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 WDR55Q9H6Y2 383 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 AKTIPQ9H8T0 292 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 ACTR5Q9H9F9 607 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 PRDM7Q9NQW5 492 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 ADAM29Q9UKF5 820 aa18.82■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A088AWK7 358 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 DSCR3O14972 297 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 RRP8O43159 456 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 FOXS1O43638 330 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 GALR3O60755 368 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 DIAPH2O60879 1101 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF10P21506 573 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 EPHA3P29320 983 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 IDH3AP50213 366 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 ACSM2AQ08AH3 577 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 SMU1Q2TAY7 513 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 AP5B1Q2VPB7 878 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 C6orf136Q5SQH8 315 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 ACSM2BQ68CK6 577 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 OR4C11Q6IEV9 310 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 GALNT18Q6P9A2 607 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 LARP4Q71RC2 724 aaKnown RBP eCLIP18.81■□□□□ 0.66e-7■■□□□ 13.2
PDLIM2-221ENST00000622702 COMMD6Q7Z4G1 85 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 C1orf52Q8N6N3 182 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 ACTRT2Q8TDY3 377 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 THOC1Q96FV9 657 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 FCRL1Q96LA6 429 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 DDX31Q9H8H2 851 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 KCNK13Q9HB14 408 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 ANKHQ9HCJ1 492 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 KLHL14Q9P2G3 628 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 DCTN4Q9UJW0 460 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 ACSL6Q9UKU0 697 aa18.81■□□□□ 0.6
PDLIM2-221ENST00000622702 CFAP47Q6ZTR5 3102 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 EPG5Q9HCE0 2579 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 URB1O60287 2271 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A1B0GX78 115 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 RTCAO00442 366 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 CPNE3O75131 537 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 PEX11AO75192 247 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 SEC22BO75396 215 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 NSA2O95478 260 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 IL1RNP18510 177 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 HIST1H1TP22492 207 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 ATP5A1P25705 553 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 SSR2P43308 183 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 SKP1P63208 163 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 DEFB134Q4QY38 66 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 PRMT9Q6P2P2 845 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 ZNF793Q6ZN11 406 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 TTLL10Q6ZVT0 673 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 PAGE2Q7Z2X7 111 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 NUDT13Q86X67 352 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 PDSS2Q86YH6 399 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 ZCCHC7Q8N3Z6 543 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 PROKR1Q8TCW9 393 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 KCNE4Q8WWG9 221 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 LRFN5Q96NI6 719 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 TXLNGQ9NUQ3 528 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 DHCR7Q9UBM7 475 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 CDC14AQ9UNH5 594 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 TMED5Q9Y3A6 229 aa18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 DSPP15924 2871 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-221ENST00000622702 A0A0G2JN53 185 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 H0YIG0 161 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 KLHL18O94889 574 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 ACPPP15309 386 aa18.79■□□□□ 0.6
PDLIM2-221ENST00000622702 CD82P27701 267 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms