RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SLC35A5Q9BS91 424 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 BDH2Q9BUT1 245 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 THEGQ9P2T0 379 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 RAB26Q9ULW5 256 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 AP3M1Q9Y2T2 418 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 DNAH14Q0VDD8 3507 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 TRBV5-3A0A0A0MS03 114 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 NPIPB8E9PQR5 432 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 BTN3A3O00478 584 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 HAT1O14929 419 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 CLOCKO15516 846 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 BMP2P12643 396 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 CTSEP14091 401 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 CMPK1P30085 196 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 HBA1P69905 142 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 REEP5Q00765 189 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 HSPB3Q12988 150 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 C16orf72Q14CZ0 275 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ALG11Q2TAA5 492 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 DEPDC1Q5TB30 811 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ZNF761Q86XN6 746 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 SLC44A2Q8IWA5 706 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 OR2A1Q8NGT9 310 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 OR2L8Q8NGY9 312 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 REXO5Q96IC2 774 aaKnown RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 MAGED4Q96JG8 741 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 MENTQ9BUN1 341 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 MS4A8Q9BY19 250 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 ABCG4Q9H172 646 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 TCEAL2Q9H3H9 227 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 TRPV5Q9NQA5 729 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 FAF1Q9UNN5 650 aaPredicted RBP9.49□□□□□ -0.89
VTA1-205ENST00000620996 HEBP2Q9Y5Z4 205 aa9.49□□□□□ -0.89
VTA1-205ENST00000620996 A0A1W2PRB8 838 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 GLOD5A6NK44 160 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 MYO1GB0I1T2 1018 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ERI3O43414 337 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 FURINP09958 794 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SRFP11831 508 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ATP6V1B1P15313 513 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PTPN6P29350 595 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PRIM2P49643 509 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TMED10P49755 219 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 DGKEP52429 567 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 CHN2P52757 468 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 RAB8AP61006 207 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PCDH1Q08174 1060 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 C10orf62Q5T681 223 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 MSANTD1Q6ZTZ1 278 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TAF8Q7Z7C8 310 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TRIM69Q86WT6 500 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 EPHX4Q8IUS5 362 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 ST13P4Q8IZP2 240 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 TBC1D19Q8N5T2 526 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 RGMAQ96B86 450 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 FCRL4Q96PJ5 515 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 MIR1-1HGQ9H1L0 117 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SOX17Q9H6I2 414 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 WASH6PQ9NQA3 447 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 BAG5Q9UL15 447 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 MAPRE3Q9UPY8 281 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PCM1Q15154 2024 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ZW10O43264 779 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TFPTP0C1Z6 253 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ERGP11308 486 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 POLR2CP19387 275 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 BCL6P41182 706 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ATP6AP1Q15904 470 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TMTC4Q5T4D3 741 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ZNF551Q7Z340 670 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 NUDT13Q86X67 352 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TRIML2Q8N7C3 387 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 DENND6BQ8NEG7 585 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 GATA6Q92908 595 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 TMBIM1Q969X1 311 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 METTL2AQ96IZ6 378 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 CCDC115Q96NT0 180 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 FOXQ1Q9C009 403 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SLC6A16Q9GZN6 736 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 SLC6A20Q9NP91 592 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PDP2Q9P2J9 529 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PADI4Q9UM07 663 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 EXO1Q9UQ84 846 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 ERVK-11Q9UQG0 969 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 MAGED1Q9Y5V3 778 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 IGKV1-8A0A0C4DH67 115 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 hCG_2039718K7EN88 272 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 SCN2BO60939 215 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 PRKRAO75569 313 aaKnown RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 DIRAS1O95057 198 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 APBB3O95704 486 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 OXSR1O95747 527 aaPredicted RBP9.48□□□□□ -0.89
VTA1-205ENST00000620996 CLIC3O95833 236 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 VIPP01282 170 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 THEGLP0DJG4 465 aa9.48□□□□□ -0.89
VTA1-205ENST00000620996 ETFAP13804 333 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms